RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 YTHDF2Q9Y5A9 579 aaKnown RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 ARID1AO14497 2285 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 WI2-2373I1.2A0A1W2PRP0 233 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 VPS37CA5D8V6 355 aaPredicted RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 GMNCA6NCL1 334 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 CLDN25C9JDP6 229 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 KPNA3O00505 521 aaPredicted RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 CCL16O15467 120 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 IGLV3-19P01714 112 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 MP68P56378 58 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 EIF3IQ13347 325 aaKnown RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 OR2F1Q13607 317 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 CDK10Q15131 360 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 ELOCQ15369 112 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 FCN2Q15485 313 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 ZNF79Q15937 498 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 FBXL19-AS1Q494R0 122 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 UBE2NLQ5JXB2 153 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 MRPL2Q5T653 305 aaKnown RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 FAM162BQ5T6X4 162 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 ZNF774Q6NX45 483 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 Q6ZS52 159 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 ZNF101Q8IZC7 436 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 OR10G6Q8NH81 332 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 CPNE2Q96FN4 548 aaPredicted RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 CACNG2Q9Y698 323 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 DOPEY2Q9Y3R5 2298 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 OBSL1O75147 1896 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 CFAP46Q8IYW2 2715 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 CREBBPQ92793 2442 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 IGKV3D-15A0A087WSY6 115 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 FAM159BA6NKW6 160 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 B4DEV8 164 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 FAAHO00519 579 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 SSNA1O43805 119 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 GATBO75879 557 aaKnown RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 GAS8-AS1O95177 125 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 WISP3O95389 354 aaPredicted RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 ADRA2AP08913 450 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 OMGP23515 440 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 MAGOHP61326 146 aaKnown RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 KRR1Q13601 381 aaKnown RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 SNCBQ16143 134 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 TEX30Q5JUR7 227 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 LCN8Q6JVE9 175 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 UGT2A3Q6UWM9 527 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 FA2HQ7L5A8 372 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 OLIG3Q7RTU3 272 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 C1orf174Q8IYL3 243 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 LINC01555Q8NAE3 123 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 UBAC2Q8NBM4 344 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ZNF555Q8NEP9 628 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 MFSD8Q8NHS3 518 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 CYGBQ8WWM9 190 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ITLN2Q8WWU7 325 aaPredicted RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 SMIM12Q96EX1 92 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 OR2A5Q96R48 311 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 SIGMAR1Q99720 223 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 PARP11Q9NR21 331 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 DIABLOQ9NR28 239 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 IDI2-AS1Q9NZ38 188 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 GLS2Q9UI32 602 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ANAPC10Q9UM13 185 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 SNX10Q9Y5X0 201 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ASXL3Q9C0F0 2248 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 C5orf42Q9H799 3197 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ZNF638Q14966 1978 aaKnown RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 AHCTF1Q8WYP5 2266 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 EEF1E1-BLOC1S5C9J1V9 151 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 I3L4J1 428 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 EEF1E1O43324 174 aaKnown RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 UPK1BO75841 260 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 APODP05090 189 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 OR4A8P0C604 315 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 CRISP2P16562 243 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ALOX5APP20292 161 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 GADD45AP24522 165 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 PPP1CCP36873 323 aaKnown RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 PSMB3P49720 205 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 SNAP25P60880 206 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 NAA20P61599 178 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 LYZP61626 148 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ZNF678Q5SXM1 525 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 FAM131AQ6UXB0 335 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 TBC1D19Q8N5T2 526 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 CYB561D1Q8N8Q1 229 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 LY6G5BQ8NDX9 201 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 RASSF5Q8WWW0 418 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 SMARCD1Q96GM5 515 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 SLC25A44Q96H78 314 aaPredicted RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 OLFM3Q96PB7 478 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 TSGA10Q9BZW7 698 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ALX4Q9H161 411 aaPredicted RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 DCSTAMPQ9H295 470 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 ZNF331Q9NQX6 463 aaPredicted RBP1.75□□□□□ -2.13
XRN1-210ENST00000472697 PARVAQ9NVD7 372 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 C21orf62Q9NYP8 219 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 POLR1DQ9Y2S0 133 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 CSAG2Q9Y5P2 127 aa1.75□□□□□ -2.13
XRN1-210ENST00000472697 SCN8AQ9UQD0 1980 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms