RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TMEM235A6NFC5 223 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 SERPINE3A8MV23 424 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 BET1O15155 118 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 MOSP00540 346 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 HLA-AP01891 365 aaKnown RBP10.67□□□□□ -0.7
HMGN1-211ENST00000471260 NMBP08949 121 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 IGHV3-43DP0DP04 118 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 RCC1P18754 421 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-211ENST00000471260 ZBTB25P24278 435 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 ECI1P42126 302 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 REG1BP48304 166 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 UNC119Q13432 240 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 MORN2Q502X0 79 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 CT45A1Q5HYN5 189 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 LY6G6FQ5SQ64 297 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 C10orf99Q6UWK7 81 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 KCNRGQ8N5I3 272 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 OR56B1Q8NGI3 324 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 CT45A3Q8NHU0 189 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 UBALD1Q8TB05 177 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 URM1Q9BTM9 101 aaKnown RBP10.67□□□□□ -0.7
HMGN1-211ENST00000471260 MFFQ9GZY8 342 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 KCNK15Q9H427 330 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 TAF9BQ9HBM6 251 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 OR2S2Q9NQN1 319 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 SDHAF2Q9NX18 166 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 RDH8Q9NYR8 311 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 JPT1Q9UK76 154 aa10.67□□□□□ -0.7
HMGN1-211ENST00000471260 NCBP2LA6PVI3 153 aaKnown RBP10.66□□□□□ -0.7
HMGN1-211ENST00000471260 AP4M1O00189 453 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 BCL2L11O43521 198 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 MPIG6BO95866 241 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 FCER2P06734 321 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 VSIG8P0DPA2 414 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 ZNF134P52741 427 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 CYCSP99999 105 aaKnown RBP10.66□□□□□ -0.7
HMGN1-211ENST00000471260 KHDC1LQ5JSQ8 128 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 STPG2Q8N412 459 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 PRR18Q8N4B5 295 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 Q8N9W7 124 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 OR1L1Q8NH94 360 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 GALMQ96C23 342 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 TM2D1Q9BX74 207 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 GPR61Q9BZJ8 451 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 TINAGL1Q9GZM7 467 aaPredicted RBP10.66□□□□□ -0.7
HMGN1-211ENST00000471260 TNFSF18Q9UNG2 199 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 TGP01266 2768 aa10.66□□□□□ -0.7
HMGN1-211ENST00000471260 IGHV3-72A0A0B4J1Y9 119 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 KANTRA0A1W2PQU2 76 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 MEIS3P1A6NDR6 274 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 M0QYG6 137 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 SLC31A2O15432 143 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 YPEL1O60688 119 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 IFNA6P05013 189 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 FGF2P09038 288 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 HIST1H1DP16402 221 aaKnown RBP10.65□□□□□ -0.7
HMGN1-211ENST00000471260 CHATP28329 748 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 RPL23AP62750 156 aaKnown RBP10.65□□□□□ -0.7
HMGN1-211ENST00000471260 SURF2Q15527 256 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-211ENST00000471260 MOGAT2Q3SYC2 334 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 CDNFQ49AH0 187 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 C11orf87Q6NUJ2 197 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 TEX38Q6PEX7 206 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 TMED4Q7Z7H5 227 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 ZNF329Q86UD4 541 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 MRPL30Q8TCC3 161 aaKnown RBP10.65□□□□□ -0.7
HMGN1-211ENST00000471260 NOL4LQ96MY1 436 aaPredicted RBP10.65□□□□□ -0.7
HMGN1-211ENST00000471260 YPEL2Q96QA6 119 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 S1PR3Q99500 378 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 RASL11BQ9BPW5 248 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 TMEM59Q9BXS4 323 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 VSIG4Q9Y279 399 aa10.65□□□□□ -0.7
HMGN1-211ENST00000471260 TRAV14DV4A0A0A6YYC5 116 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 C9orf170A2RU37 121 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 OR5H14A6NHG9 310 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 MFNGO00587 321 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 IGLL1P15814 213 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 NUP62P37198 522 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-211ENST00000471260 GPR12P47775 334 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 TAS2R46P59540 309 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 SCGB2B2Q4G0G5 96 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 ZNF660Q6AZW8 331 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-211ENST00000471260 FAM53AQ6NSI3 398 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-211ENST00000471260 Q6ZPA2 131 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 ACOT7LQ6ZUV0 252 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 ZNF546Q86UE3 836 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 HOGA1Q86XE5 327 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 OR10V1Q8NGI7 309 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 ST8SIA2Q92186 375 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 ABHD14AQ9BUJ0 271 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 NMES1Q9C002 83 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 LPAR5Q9H1C0 372 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 RIMS4Q9H426 269 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-211ENST00000471260 ZNF580Q9UK33 172 aa10.64□□□□□ -0.71
HMGN1-211ENST00000471260 DBX1A6NMT0 343 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 NUDT19A8MXV4 375 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 SIX6O95475 246 aa10.63□□□□□ -0.71
HMGN1-211ENST00000471260 PRB2P02812 416 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms