RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DPF1Q92782 380 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 ABHD14BQ96IU4 210 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 RBM14Q96PK6 669 aaKnown RBP7.18□□□□□ -1.26
SF3A1-206ENST00000471037 S1PR3Q99500 378 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 HSD17B10Q99714 261 aaKnown RBP7.18□□□□□ -1.26
SF3A1-206ENST00000471037 RTBDNQ9BSG5 229 aaPredicted RBP7.18□□□□□ -1.26
SF3A1-206ENST00000471037 SLC25A33Q9BSK2 321 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 SDHAF2Q9NX18 166 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 DPM3Q9P2X0 92 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 RNF150Q9ULK6 438 aa7.18□□□□□ -1.26
SF3A1-206ENST00000471037 SAA2-SAA4A0A096LPE2 208 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 A0A1W2PPE3 182 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 CRYM-AS1A6NIL9 109 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 BUB1B-PAK6H3BSN5 160 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 M0QZK8 103 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 B3GALNT1O75752 331 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 IL5P05113 134 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 SAA2P0DJI9 122 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-206ENST00000471037 ANXA7P20073 488 aaKnown RBP7.17□□□□□ -1.26
SF3A1-206ENST00000471037 CD24P25063 80 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 HOXD3P31249 432 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-206ENST00000471037 CEACAM3P40198 252 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 DHODHQ02127 395 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 CATR1Q13166 79 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 PHLDA2Q53GA4 152 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 C10orf99Q6UWK7 81 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF66Q6ZN08 573 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF833PQ6ZTB9 187 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 KCTD9Q7L273 389 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 SGPP2Q8IWX5 399 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 MRPL41Q8IXM3 137 aaKnown RBP7.17□□□□□ -1.26
SF3A1-206ENST00000471037 ODF3L1Q8IXM7 274 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 CAPSLQ8WWF8 208 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 RTN4IP1Q8WWV3 396 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-206ENST00000471037 ST6GALNAC6Q969X2 333 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 TMEM230Q96A57 120 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 ADTRPQ96IZ2 230 aa7.17□□□□□ -1.26
SF3A1-206ENST00000471037 MCRIP2Q9BUT9 160 aaKnown RBP7.17□□□□□ -1.26
SF3A1-206ENST00000471037 GPN1Q9HCN4 374 aaPredicted RBP7.17□□□□□ -1.26
SF3A1-206ENST00000471037 TEX13DA0A0J9YY54 714 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-206ENST00000471037 C7orf66A4D0T2 115 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 SNRPGP15A8MWD9 76 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 LEUTXA8MZ59 168 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 OOSP1A8MZH6 123 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 M0R1X1 148 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 MPPED1O15442 326 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 TXNL1O43396 289 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 PGLYRP1O75594 196 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-206ENST00000471037 OR4E1P0C645 316 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 ANXA3P12429 323 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 AKR1C4P17516 323 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 VAMP1P23763 118 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 F2RP25116 425 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 THBS3P49746 956 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 RAB25P57735 213 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 EIF4EBP1Q13541 118 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-206ENST00000471037 TATDN3Q17R31 274 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 C4orf46Q504U0 113 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 RPL39P5Q59GN2 51 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 KHDC1LQ5JSQ8 128 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 GLDNQ6ZMI3 551 aaPredicted RBP7.16□□□□□ -1.26
SF3A1-206ENST00000471037 Q6ZNX1 250 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 LYG2Q86SG7 212 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 TBC1D26Q86UD7 250 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 TCTEX1D1Q8N7M0 179 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 ADAD2Q8NCV1 583 aaKnown RBP7.16□□□□□ -1.26
SF3A1-206ENST00000471037 GALNT14Q96FL9 552 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 C5orf30Q96GV9 206 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF251Q9BRH9 671 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 NAA60Q9H7X0 242 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 LIN7CQ9NUP9 197 aaKnown RBP7.16□□□□□ -1.26
SF3A1-206ENST00000471037 KCNIP3Q9Y2W7 256 aa7.16□□□□□ -1.26
SF3A1-206ENST00000471037 PIGBOS1A0A0B4J2F0 54 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 C3orf85A0A1B0GTC6 90 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 C9orf170A2RU37 121 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 PSMB11A5LHX3 300 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 SH2D7A6NKC9 451 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 H0Y980 276 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 LY6LH3BQJ8 138 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 TNFSF12O43508 249 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 CREBL2O60519 120 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 PROP1O75360 226 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 SFT2D2O95562 160 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 HLA-AP01891 365 aaKnown RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 GAPDHP04406 335 aaKnown RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 DUTP33316 252 aaKnown RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 KIR2DS2P43631 304 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 RPL23AP62750 156 aaKnown RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 SUPT4H1P63272 117 aaKnown RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 SRPXP78539 464 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 TAGLNQ01995 201 aaKnown RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF816Q0VGE8 651 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 DHRS2Q13268 280 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 PPP1R1AQ13522 171 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 CCDC144NLQ6NUI1 221 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 TGIF2LXQ8IUE1 241 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 OR8H3Q8N146 312 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 CD300LFQ8TDQ1 290 aa7.15□□□□□ -1.26
SF3A1-206ENST00000471037 ZNF431Q8TF32 576 aaPredicted RBP7.15□□□□□ -1.26
SF3A1-206ENST00000471037 RPEQ96AT9 228 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms