RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 ZNF134P52741 427 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 ARF6P62330 175 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 PAX2Q02962 417 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 FGL1Q08830 312 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 TMEM187Q14656 261 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 FCN2Q15485 313 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 RTL8BQ17RB0 113 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 HLA-DRB5Q30154 266 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 CCDC144NLQ6NUI1 221 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 ZNF833PQ6ZTB9 187 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 FAM219AQ8IW50 185 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 TCTE3Q8IZS6 198 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 OR5M8Q8NGP6 311 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 OR51H1Q8NH63 302 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 OR4S2Q8NH73 311 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 TCTEX1D2Q8WW35 142 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 RRNAD1Q96FB5 475 aaKnown RBP5.39□□□□□ -1.55
VAMP3-202ENST00000470357 ABHD14BQ96IU4 210 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 OR2A7Q96R45 310 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 TP53RKQ96S44 253 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 NEURL2Q9BR09 285 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 PDCD10Q9BUL8 212 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 SIRPDQ9H106 197 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 PLEKHA2Q9HB19 425 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 LPAR2Q9HBW0 351 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 COMMD9Q9P000 198 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 TBL2Q9Y4P3 447 aaKnown RBP5.39□□□□□ -1.55
VAMP3-202ENST00000470357 INSIG2Q9Y5U4 225 aa5.39□□□□□ -1.55
VAMP3-202ENST00000470357 MEGF8Q7Z7M0 2845 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 CR1P17927 2039 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 C5orf51A6NDU8 294 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 FAM157AC9JC47 383 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 BUB1B-PAK6H3BSN5 160 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 SLC31A2O15432 143 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 TNFSF12O43508 249 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 HPRT1P00492 218 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 HRASP01112 189 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 GAPDHP04406 335 aaKnown RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 HNRNPCP07910 306 aaKnown RBP eCLIP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 PET100P0DJ07 73 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 HTR1DP28221 377 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 LGALS4P56470 323 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 ERVK-16P61578 105 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 CD83Q01151 205 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 PAX8Q06710 450 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 SRSF4Q08170 494 aaKnown RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 EIF4EBP1Q13541 118 aaPredicted RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 ANKRD55Q3KP44 614 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 MINOS1Q5TGZ0 78 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 DCAF12L2Q5VW00 463 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 TMEM268Q5VZI3 342 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 THOC7Q6I9Y2 204 aaKnown RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 VMO1Q7Z5L0 202 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 TGIF2LXQ8IUE1 241 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 ODF3L1Q8IXM7 274 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 SPAG16Q8N0X2 631 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 OR8H3Q8N146 312 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 PNKDQ8N490 385 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 TEX29Q8N6K0 151 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 Q8N7P7 452 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 OR11H7Q8NGC8 314 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 RNASE11Q8TAA1 199 aaKnown RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 LEAP2Q969E1 77 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 LSM10Q969L4 123 aaKnown RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 RPEQ96AT9 228 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 MSI2Q96DH6 328 aaKnown RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 AJUBAQ96IF1 538 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 C2orf50Q96LR7 162 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 REG4Q9BYZ8 158 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 NMES1Q9C002 83 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 RANBP3Q9H6Z4 567 aaPredicted RBP5.38□□□□□ -1.55
VAMP3-202ENST00000470357 DPM3Q9P2X0 92 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 MINOS1-NBL1R4GNA1 71 aa5.38□□□□□ -1.55
VAMP3-202ENST00000470357 ABCA1O95477 2261 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 A0A096LNT2 108 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 A0A1B0GU03 582 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 C13orf42A0A1B0GVH6 325 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 A0A1W2PPE3 182 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 FAM90A9PA6NNJ1 464 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 FAM25EA8MYX2 175 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 FCGR3BO75015 233 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 LY86O95711 162 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 IGHV3-7P01780 117 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 ARG1P05089 322 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 HOXB5P09067 269 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 CXCL3P19876 107 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 COX7A1P24310 79 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 LPAR6P43657 344 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 UBE2E1P51965 193 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 AKR1C2P52895 323 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 BPIFB3P59826 476 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 ZNF816Q0VGE8 651 aaPredicted RBP5.37□□□□□ -1.55
VAMP3-202ENST00000470357 IAH1Q2TAA2 248 aaPredicted RBP5.37□□□□□ -1.55
VAMP3-202ENST00000470357 SP6Q3SY56 376 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 ZFP69Q49AA0 526 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 MIDNQ504T8 468 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 RPL39P5Q59GN2 51 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 GGNBP1Q5YKI7 109 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 PDPNQ86YL7 162 aa5.37□□□□□ -1.55
VAMP3-202ENST00000470357 SELENOHQ8IZQ5 122 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms