RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 CCDC144NLQ6NUI1 221 aa14.09□□□□□ -0.15
RPL39-202ENST00000468844 PDPNQ86YL7 162 aa14.09□□□□□ -0.15
RPL39-202ENST00000468844 NANPQ8TBE9 248 aa14.09□□□□□ -0.15
RPL39-202ENST00000468844 IL22RA2Q969J5 263 aa14.09□□□□□ -0.15
RPL39-202ENST00000468844 SMR3AQ99954 134 aa14.09□□□□□ -0.15
RPL39-202ENST00000468844 PLEKHA2Q9HB19 425 aa14.09□□□□□ -0.15
RPL39-202ENST00000468844 WASHC3Q9Y3C0 194 aa14.09□□□□□ -0.15
RPL39-202ENST00000468844 MPTX1A8MV57 137 aa14.08□□□□□ -0.16
RPL39-202ENST00000468844 GOSR2O14653 212 aa14.08□□□□□ -0.16
RPL39-202ENST00000468844 MC5RP33032 325 aa14.08□□□□□ -0.16
RPL39-202ENST00000468844 SEC22AQ96IW7 307 aa14.08□□□□□ -0.16
RPL39-202ENST00000468844 MGAT4CQ9UBM8 478 aa14.08□□□□□ -0.16
RPL39-202ENST00000468844 TEP1Q99973 2627 aaKnown RBP14.08□□□□□ -0.16
RPL39-202ENST00000468844 MARCH11A6NNE9 402 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 G3V3Q6 166 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 KRASP01116 189 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 IGKV1-5P01602 117 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 RAB13P51153 203 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 H2BFSP57053 126 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 DHRS7BQ6IAN0 325 aaPredicted RBP14.07□□□□□ -0.16
RPL39-202ENST00000468844 ZNF680Q8NEM1 530 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 OR5M8Q8NGP6 311 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 RAB18Q9NP72 206 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 NUP50Q9UKX7 468 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 A0A0G2JRQ6 117 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 SIX6O95475 246 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 RRASP10301 218 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 HLA-GP17693 338 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 VDAC1P21796 283 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 CD24P25063 80 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 G6PCP35575 357 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 FBLN7Q53RD9 439 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 TMEM177Q53S58 311 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 GGNBP1Q5YKI7 109 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 VKORC1L1Q8N0U8 176 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 OR4C13Q8NGP0 309 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 OR2T35Q8NGX2 323 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 RITA1Q96K30 269 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 CITED4Q96RK1 184 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 TMUB1Q9BVT8 246 aa14.07□□□□□ -0.16
RPL39-202ENST00000468844 DUXBA0A1W2PPF3 345 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 SRRM4A7MD48 611 aaKnown RBP14.06□□□□□ -0.16
RPL39-202ENST00000468844 VENTXO95231 258 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 AKR1C2P52895 323 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 BPIFB3P59826 476 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 NMSQ5H8A3 153 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 C22orf15Q8WYQ4 148 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 FLYWCH2Q96CP2 140 aaKnown RBP14.06□□□□□ -0.16
RPL39-202ENST00000468844 R3HDM4Q96D70 268 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 OR10C1Q96KK4 312 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 COMMD9Q9P000 198 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 TMED3Q9Y3Q3 217 aa14.06□□□□□ -0.16
RPL39-202ENST00000468844 NQO2P16083 231 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 CD1BP29016 333 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 FAM120AOSQ5T036 256 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 IL17RELQ6ZVW7 336 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 BCL6BQ8N143 479 aaPredicted RBP14.05□□□□□ -0.16
RPL39-202ENST00000468844 OSR1Q8TAX0 266 aaPredicted RBP14.05□□□□□ -0.16
RPL39-202ENST00000468844 HARBI1Q96MB7 349 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 MEGF9Q9H1U4 602 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 NIPBLQ6KC79 2804 aaeCLIP14.05□□□□□ -0.166e-29■■■■■ 94.3
RPL39-202ENST00000468844 FAM25EA8MYX2 175 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 SHOXO15266 292 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 IGKV1D-33P01593 117 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 IGKV1-33P01594 117 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 P0C879 139 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 IZUMO4Q1ZYL8 232 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 SSX9Q7RTT3 188 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 WDR89Q96FK6 387 aaPredicted RBP14.05□□□□□ -0.16
RPL39-202ENST00000468844 RHOVQ96L33 236 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 MS4A7Q9GZW8 240 aaPredicted RBP14.05□□□□□ -0.16
RPL39-202ENST00000468844 YAE1D1Q9NRH1 226 aa14.05□□□□□ -0.16
RPL39-202ENST00000468844 FAM90A9PA6NNJ1 464 aa14.04□□□□□ -0.16
RPL39-202ENST00000468844 SNRNP70P08621 437 aaKnown RBP14.04□□□□□ -0.16
RPL39-202ENST00000468844 FBP1P09467 338 aa14.04□□□□□ -0.16
RPL39-202ENST00000468844 LSM10Q969L4 123 aaKnown RBP14.04□□□□□ -0.16
RPL39-202ENST00000468844 FAM96BQ9Y3D0 163 aa14.04□□□□□ -0.16
RPL39-202ENST00000468844 PIGBOS1A0A0B4J2F0 54 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 LINC00862A6NCI5 91 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 IFNA21P01568 189 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 ARHGDIBP52566 201 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 POU2AF1Q16633 256 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 Q6ZRM9 215 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 C9orf139Q6ZV77 190 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 DMBX1Q8NFW5 382 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 RNASE11Q8TAA1 199 aaKnown RBP14.03□□□□□ -0.16
RPL39-202ENST00000468844 RRNAD1Q96FB5 475 aaKnown RBP14.03□□□□□ -0.16
RPL39-202ENST00000468844 FN1P02751 2386 aaKnown RBP14.03□□□□□ -0.16
RPL39-202ENST00000468844 C13orf42A0A1B0GVH6 325 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 MDFIC2A0A1B0GVS7 189 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 C5orf51A6NDU8 294 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 MPC2O95563 127 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 LY6G6DO95868 133 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 HRASP01112 189 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 IGLV2-23P01705 113 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 GIPP09681 153 aaPredicted RBP14.03□□□□□ -0.16
RPL39-202ENST00000468844 CD99P14209 185 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 CNTFRP26992 372 aa14.03□□□□□ -0.16
RPL39-202ENST00000468844 RPS16P62249 146 aaKnown RBP14.03□□□□□ -0.16
RPL39-202ENST00000468844 GPR146Q96CH1 333 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms