RNA–Protein interactions for RNA: ENST00000468839.1

CRAMP1-206, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 451 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-206ENST00000468839 RAB13P51153 203 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 TAS2R30P59541 319 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 VAMP2P63027 116 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 RELBQ01201 579 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 PAX8Q06710 450 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 TNFRSF9Q07011 255 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 DEFB113Q30KQ7 82 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 TEX261Q6UWH6 196 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 ZNF767PQ75MW2 155 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 OR2C3Q8N628 320 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 OR4C13Q8NGP0 309 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 OR52E5Q8NH55 327 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 FLYWCH2Q96CP2 140 aaKnown RBP12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 MBD6Q96DN6 1003 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 SMIM8Q96KF7 97 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 TMEM140Q9NV12 185 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 DPM3Q9P2X0 92 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 U3KQ87 197 aa12.15□□□□□ -0.46
CRAMP1-206ENST00000468839 CR1P17927 2039 aa12.15□□□□□ -0.47
CRAMP1-206ENST00000468839 TNCP24821 2201 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 IGHV1-3A0A0C4DH29 117 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 RNASEK-C17orf49H0YIS7 233 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 H7C2Y5 167 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 TAAR5O14804 337 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 SSSCA1O60232 199 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 TOX4O94842 621 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 TMEM50AO95807 157 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 CEACAM3P40198 252 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 RPL23AP62750 156 aaKnown RBP12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 PRB3Q04118 309 aaPredicted RBP12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 KLRD1Q13241 179 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 TPTE2P1Q5T6R2 138 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 MINOS1Q5TGZ0 78 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 ZNF429Q86V71 674 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 PUSL1Q8N0Z8 303 aaKnown RBP12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 OR4A16Q8NH70 328 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 RPEQ96AT9 228 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 TBX15Q96SF7 602 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 SLC25A31Q9H0C2 315 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 RBKSQ9H477 322 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 LYRM2Q9NU23 88 aaPredicted RBP12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 MINOS1-NBL1R4GNA1 71 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 DCHS2Q6V1P9 2916 aa12.14□□□□□ -0.47
CRAMP1-206ENST00000468839 FAM24AA6NFZ4 105 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 SRRM4A7MD48 611 aaKnown RBP12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 OOSP1A8MZH6 123 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 UPK2O00526 184 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 SHOXO15266 292 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 LY86O95711 162 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 USF1P22415 310 aaPredicted RBP12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 LGALS7P47929 136 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 UBE2KP61086 200 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 LDLRAD2Q5SZI1 272 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 VKORC1L1Q8N0U8 176 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 OR8H3Q8N146 312 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 ZNF680Q8NEM1 530 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 ZC4H2Q9NQZ6 224 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 CYTL1Q9NRR1 136 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 BET1LQ9NYM9 111 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 TBL2Q9Y4P3 447 aaKnown RBP12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 WSB1Q9Y6I7 421 aa12.13□□□□□ -0.47
CRAMP1-206ENST00000468839 A0A096LNT2 108 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 A0A1W2PPI3 338 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 NXPH3O95157 252 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 CFDP00746 253 aaPredicted RBP12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 UBE2E1P51965 193 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 SPCS3P61009 180 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 RPS16P62249 146 aaKnown RBP12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 UBA52P62987 128 aaKnown RBP12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 TMEM252Q8N6L7 170 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 CIB3Q96Q77 187 aaPredicted RBP12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 RNF5Q99942 180 aa12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 QTRT1Q9BXR0 403 aaKnown RBP12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 MS4A7Q9GZW8 240 aaPredicted RBP12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 FOXA2Q9Y261 457 aaPredicted RBP12.12□□□□□ -0.47
CRAMP1-206ENST00000468839 SPG11Q96JI7 2443 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 IGSF23A1L1A6 192 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 C15orf61A6NNL5 157 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 RBMXL2O75526 392 aaKnown RBP12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 IFNA7P01567 189 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 CD1BP29016 333 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 EWSR1Q01844 656 aaKnown RBP eCLIP12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 HABP2Q14520 560 aaPredicted RBP12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 PRSS57Q6UWY2 283 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 MOB3BQ86TA1 216 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 OR4A5Q8NH83 315 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 VSTM2AQ8TAG5 236 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 STOML3Q8TAV4 291 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 ST8SIA2Q92186 375 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 ZNF471Q9BX82 626 aaPredicted RBP12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 LPAR2Q9HBW0 351 aa12.11□□□□□ -0.47
CRAMP1-206ENST00000468839 TMEM14BQ9NUH8 114 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms