RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 ANXA10Q9UJ72 324 aa2.57□□□□□ -2
GPNMB-207ENST00000468723 MCTS1Q9ULC4 181 aaKnown RBP2.57□□□□□ -2
GPNMB-207ENST00000468723 PSG11Q9UQ72 335 aa2.57□□□□□ -2
GPNMB-207ENST00000468723 ORC6Q9Y5N6 252 aa2.57□□□□□ -2
GPNMB-207ENST00000468723 CSMD2Q7Z408 3487 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 TMED7-TICAM2A0A0A6YYA0 188 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 DPRXA6NFQ7 191 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 ZNF705GA8MUZ8 300 aaPredicted RBP2.56□□□□□ -2
GPNMB-207ENST00000468723 CLDN34H7C241 214 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 PANO1I0J062 215 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 PSPHP1O15172 72 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 NDUFS5O43920 106 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 SOD3P08294 240 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 ZNF3P17036 446 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 HLA-GP17693 338 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 CRYGSP22914 178 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 ME2P23368 584 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 AGTR1P30556 359 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 AQP5P55064 265 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 CDK5Q00535 292 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 EMX2Q04743 252 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 BSPH1Q075Z2 132 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 FUT5Q11128 374 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 RAB31Q13636 194 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 MPPED2Q15777 294 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 ARHGAP11BQ3KRB8 267 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 CDNFQ49AH0 187 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 CYB5R2Q6BCY4 276 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 CASP12Q6UXS9 341 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 WDFY1Q8IWB7 410 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 RIMKLAQ8IXN7 391 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 GAPTQ8N292 157 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 ZCCHC24Q8N2G6 241 aaKnown RBP2.56□□□□□ -2
GPNMB-207ENST00000468723 ZNF645Q8N7E2 425 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 OR5W2Q8NH69 310 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 OR2AE1Q8NHA4 323 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 RNASEH2CQ8TDP1 164 aaKnown RBP2.56□□□□□ -2
GPNMB-207ENST00000468723 RNF138Q8WVD3 245 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 MAL2Q969L2 176 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 ROPN1LQ96C74 230 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 ZNF799Q96GE5 643 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 KCNS1Q96KK3 526 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 C18orf15Q96N68 181 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 OR52E6Q96RD3 313 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 CAMK2N2Q96S95 79 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 TMED9Q9BVK6 235 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 FGF23Q9GZV9 251 aaPredicted RBP2.56□□□□□ -2
GPNMB-207ENST00000468723 OR51B6Q9H340 312 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 OR52D1Q9H346 318 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 RNF122Q9H9V4 155 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 C12orf4Q9NQ89 552 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 UBQLN4Q9NRR5 601 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 TAS2R7Q9NYW3 318 aa2.56□□□□□ -2
GPNMB-207ENST00000468723 PUS1Q9Y606 427 aaKnown RBP eCLIP2.56□□□□□ -2
GPNMB-207ENST00000468723 YLPM1P49750 1951 aaKnown RBP2.56□□□□□ -2
GPNMB-207ENST00000468723 POLQO75417 2590 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 PRRC2CQ9Y520 2896 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 FBN2P35556 2912 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 CRYBG3Q68DQ2 2970 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 A0A1W2PP18 115 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 C5orf63A6NC05 138 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 MYO9AB2RTY4 2548 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 E7EQL1 145 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 LRRN3E7EW58 273 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 LYNX1G3V0Z9 82 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 M0R1X1 148 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 HMGN4O00479 90 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 KPNA4O00629 521 aaPredicted RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 CDIPTO14735 213 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 TAAR5O14804 337 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 ANKRD17O75179 2603 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 GCM2O75603 506 aaPredicted RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 SNAP29O95721 258 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 F8P00451 2351 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 OPN1SWP03999 348 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 OCMP0CE72 109 aaPredicted RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 IGHV1-8P0DP01 117 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 LYNX1P0DP58 116 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 PRPS1L1P21108 318 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 OR10A3P58181 314 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 HPCAP84074 193 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 CHD3Q12873 2000 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 SKP2Q13309 424 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 MADCAM1Q13477 382 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 CASP8Q14790 479 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 BCL2A1Q16548 175 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 CLEC12BQ2HXU8 276 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 FBXL19-AS1Q494R0 122 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 SMUG1Q53HV7 270 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 TTMPQ5BVD1 217 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 OR10J3Q5JRS4 329 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 MRPL2Q5T653 305 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 TSPO2Q5TGU0 170 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 SAXO2Q658L1 398 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 SPNS3Q6ZMD2 512 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 ALPK2Q86TB3 2170 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 MRPL52Q86TS9 123 aaKnown RBP2.55□□□□□ -2
GPNMB-207ENST00000468723 CALHM1Q8IU99 346 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 FUNDC1Q8IVP5 155 aa2.55□□□□□ -2
GPNMB-207ENST00000468723 C10orf111Q8N326 155 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms