RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 RBKSQ9H477 322 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 WSB1Q9Y6I7 421 aa15.41■□□□□ 0.06
SMC4-209ENST00000468653 IGSF23A1L1A6 192 aa15.4■□□□□ 0.06
SMC4-209ENST00000468653 SHOXO15266 292 aa15.4■□□□□ 0.06
SMC4-209ENST00000468653 FOXH1O75593 365 aa15.4■□□□□ 0.06
SMC4-209ENST00000468653 TPT1P13693 172 aaKnown RBP15.4■□□□□ 0.06
SMC4-209ENST00000468653 OR2B8PP59922 312 aa15.4■□□□□ 0.06
SMC4-209ENST00000468653 LHX4Q969G2 390 aa15.4■□□□□ 0.06
SMC4-209ENST00000468653 RBMXL1Q96E39 390 aaKnown RBP15.4■□□□□ 0.06
SMC4-209ENST00000468653 QTRT1Q9BXR0 403 aaKnown RBP15.4■□□□□ 0.06
SMC4-209ENST00000468653 PSENENQ9NZ42 101 aa15.4■□□□□ 0.06
SMC4-209ENST00000468653 KPTNQ9Y664 436 aa15.4■□□□□ 0.06
SMC4-209ENST00000468653 UTP20O75691 2785 aaKnown RBP15.4■□□□□ 0.06
SMC4-209ENST00000468653 IGHV2-70DA0A0C4DH43 119 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 ARG1P05089 322 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 OR4A47Q6IF82 309 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 PDPNQ86YL7 162 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 OR4P4Q8NGL7 312 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 STOML3Q8TAV4 291 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 OSR1Q8TAX0 266 aaPredicted RBP15.39■□□□□ 0.05
SMC4-209ENST00000468653 SCARB1Q8WTV0 552 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 FLYWCH2Q96CP2 140 aaKnown RBP15.39■□□□□ 0.05
SMC4-209ENST00000468653 BSCL2Q96G97 398 aaPredicted RBP15.39■□□□□ 0.05
SMC4-209ENST00000468653 SMIM8Q96KF7 97 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 WASHC3Q9Y3C0 194 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 VWC2LB2RUY7 222 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 H3BP45 60 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 IFNA17P01571 189 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 GAPDHP04406 335 aaKnown RBP15.39■□□□□ 0.05
SMC4-209ENST00000468653 MC5RP33032 325 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 RAB13P51153 203 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 TAS2R30P59541 319 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 RAB14P61106 215 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 EIF5AP63241 154 aaKnown RBP15.39■□□□□ 0.05
SMC4-209ENST00000468653 RELBQ01201 579 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 PAX2Q02962 417 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 POU2AF1Q16633 256 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 RPL7L1Q6DKI1 246 aaKnown RBP15.39■□□□□ 0.05
SMC4-209ENST00000468653 OR11H6Q8NGC7 330 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 RPEQ96AT9 228 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 SPG11Q96JI7 2443 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 HARBI1Q96MB7 349 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 GSX2Q9BZM3 304 aa15.39■□□□□ 0.05
SMC4-209ENST00000468653 TRAV3A0A0B4J244 114 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 CEBPZOSA8MTT3 80 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 PAX1P15863 534 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 KLRD1Q13241 179 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 VMO1Q7Z5L0 202 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 BAP18Q8IXM2 172 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 OR4C13Q8NGP0 309 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 PHYHIPLQ96FC7 376 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 MMP26Q9NRE1 261 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 INSIG2Q9Y5U4 225 aa15.38■□□□□ 0.05
SMC4-209ENST00000468653 IGHV4-61A0A0C4DH41 118 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 TXNL1O43396 289 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 JTBO76095 146 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 CST7O76096 145 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 HTR1DP28221 377 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 DSCR9P59020 149 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 BAXQ07812 192 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 TMEM177Q53S58 311 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 STX12Q86Y82 276 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 DTD1Q8TEA8 209 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 MARVELD3Q96A59 401 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 CACFD1Q9UGQ2 172 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 NUP50Q9UKX7 468 aa15.37■□□□□ 0.05
SMC4-209ENST00000468653 IGHV4-30-2A0A087WSY4 118 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 BORCS7-ASMTA0A0B4J1R7 106 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 SRRM4A7MD48 611 aaKnown RBP15.36■□□□□ 0.05
SMC4-209ENST00000468653 RPS16P62249 146 aaKnown RBP15.36■□□□□ 0.05
SMC4-209ENST00000468653 AARDQ4LEZ3 155 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 SPINK9Q5DT21 86 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 SPANXN5Q5MJ07 72 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 MOB3BQ86TA1 216 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 SLC7A5P1Q8MH63 180 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 ZDHHC16Q969W1 377 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 CIB3Q96Q77 187 aaPredicted RBP15.36■□□□□ 0.05
SMC4-209ENST00000468653 UNKLQ9H9P5 680 aaKnown RBP15.36■□□□□ 0.05
SMC4-209ENST00000468653 IGHV1-3A0A0C4DH29 117 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 LEUTXA8MZ59 168 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 FAM157AC9JC47 383 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 SPCS3P61009 180 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 TMEM267Q0VDI3 215 aaPredicted RBP15.36■□□□□ 0.05
SMC4-209ENST00000468653 HCP5Q6MZN7 132 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 TMEM217Q8N7C4 229 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 SIRPDQ9H106 197 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 LPAR2Q9HBW0 351 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 WFDC1Q9HC57 220 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 DPM3Q9P2X0 92 aa15.36■□□□□ 0.05
SMC4-209ENST00000468653 IGHV3-72A0A0B4J1Y9 119 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 C15orf61A6NNL5 157 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 LY6LH3BQJ8 138 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 TOX4O94842 621 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 SAA1P0DJI8 122 aaPredicted RBP15.35■□□□□ 0.05
SMC4-209ENST00000468653 CEACAM3P40198 252 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 SULT1A1P50225 295 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 DVL1P1P54792 670 aaPredicted RBP15.35■□□□□ 0.05
SMC4-209ENST00000468653 CLINT1Q14677 625 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 ZNF429Q86V71 674 aa15.35■□□□□ 0.05
SMC4-209ENST00000468653 PDZD9Q8IXQ8 264 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms