RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 LRRC34Q8IZ02 419 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 NATD1Q8N6N6 113 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 OR7D2Q96RA2 312 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 GREB1Q4ZG55 1949 aa-0.86□□□□□ -2.55
SSB-208ENST00000468600 FLNAP21333 2647 aaKnown RBP-0.87□□□□□ -2.55
SSB-208ENST00000468600 ATP5J2P56134 94 aa-0.87□□□□□ -2.55
SSB-208ENST00000468600 FKBP1AP62942 108 aaKnown RBP-0.87□□□□□ -2.55
SSB-208ENST00000468600 ZNF321PQ8N8H1 164 aa-0.87□□□□□ -2.55
SSB-208ENST00000468600 OR2Y1Q8NGV0 311 aa-0.87□□□□□ -2.55
SSB-208ENST00000468600 ZNF418Q8TF45 676 aaPredicted RBP-0.87□□□□□ -2.55
SSB-208ENST00000468600 PATE1Q8WXA2 126 aa-0.87□□□□□ -2.55
SSB-208ENST00000468600 NMNAT3Q96T66 252 aa-0.87□□□□□ -2.55
SSB-208ENST00000468600 COMMD9Q9P000 198 aa-0.87□□□□□ -2.55
SSB-208ENST00000468600 KIF24Q5T7B8 1368 aa-0.87□□□□□ -2.55
SSB-208ENST00000468600 HMCN2Q8NDA2 5059 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 A0A1B0GX12 115 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 CLDN25C9JDP6 229 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 NCR3O14931 201 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 CASC3O15234 703 aaKnown RBP-0.88□□□□□ -2.55
SSB-208ENST00000468600 SPINK1P00995 79 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 ZNF93P35789 620 aaPredicted RBP-0.88□□□□□ -2.55
SSB-208ENST00000468600 UBE2IP63279 158 aaKnown RBP-0.88□□□□□ -2.55
SSB-208ENST00000468600 C1DQ13901 141 aaKnown RBP-0.88□□□□□ -2.55
SSB-208ENST00000468600 ZNF345Q14585 488 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 NDUFA5Q16718 116 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 BSXQ3C1V8 233 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 SPINK9Q5DT21 86 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 BAP18Q8IXM2 172 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 C1orf174Q8IYL3 243 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 OR11H6Q8NGC7 330 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 KIAA1143Q96AT1 154 aaPredicted RBP-0.88□□□□□ -2.55
SSB-208ENST00000468600 MS4A6EQ96DS6 147 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 UGT2B28Q9BY64 529 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 IFT46Q9NQC8 304 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 THSD7AQ9UPZ6 1657 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 ZANQ9Y493 2812 aa-0.88□□□□□ -2.55
SSB-208ENST00000468600 UNC79Q9P2D8 2635 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 OR6C6A6NF89 314 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 MRASO14807 208 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 CCL5P13501 91 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 ZNF846Q147U1 533 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 STK38Q15208 465 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 KLK9Q9UKQ9 250 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 SNX24Q9Y343 169 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 CREBBPQ92793 2442 aa-0.89□□□□□ -2.55
SSB-208ENST00000468600 SNRNP200O75643 2136 aaKnown RBP-0.89□□□□□ -2.55
SSB-208ENST00000468600 CACNA1AO00555 2505 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 TRBV10-2A0A0K0K1G8 114 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 C9JCJ5 164 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 EFNA4P52798 201 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 DAD1P61803 113 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 VAMP3Q15836 100 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 PRRT1Q99946 306 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 RPRD1BQ9NQG5 326 aaKnown RBP-0.9□□□□□ -2.55
SSB-208ENST00000468600 CISHQ9NSE2 258 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 EMC3Q9P0I2 261 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 NAT8Q9UHE5 227 aa-0.9□□□□□ -2.55
SSB-208ENST00000468600 TNXBP22105 4242 aa-0.91□□□□□ -2.55
SSB-208ENST00000468600 E9PCH4 1651 aa-0.91□□□□□ -2.55
SSB-208ENST00000468600 CHD2O14647 1828 aaKnown RBP-0.91□□□□□ -2.55
SSB-208ENST00000468600 INE1O15225 51 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 UGT2B11O75310 529 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 PMP2P02689 132 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 MSMBP08118 114 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 AGTR1P30556 359 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 MESTQ5EB52 335 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 PACRGLQ8N7B6 248 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 HINT2Q9BX68 163 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 LRP2P98164 4655 aa-0.91□□□□□ -2.56
SSB-208ENST00000468600 A0A1B0GW54 56 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 M0R381 172 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 HYPMO75409 117 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 HBZP02008 142 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 METTL15P1P0C7V9 234 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 CDK9P50750 372 aaKnown RBP-0.92□□□□□ -2.56
SSB-208ENST00000468600 OR10A3P58181 314 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 LCN8Q6JVE9 175 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 ATP5L2Q7Z4Y8 100 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 IFT81Q8WYA0 676 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 LRRC39Q96DD0 335 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 CLEC2DQ9UHP7 191 aa-0.92□□□□□ -2.56
SSB-208ENST00000468600 ANAPC1Q9H1A4 1944 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 TRAV8-1A0A0A6YYK1 113 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 H0YIV9 168 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 COPEO14579 308 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 TFPTP0C1Z6 253 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 MSNP26038 577 aaKnown RBP-0.93□□□□□ -2.56
SSB-208ENST00000468600 EXOC3L4Q17RC7 722 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 KRTAP20-2Q3LI61 65 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 OR10J3Q5JRS4 329 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 GPHB5Q86YW7 130 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 ACOT12Q8WYK0 555 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 CATSPER2Q96P56 530 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 XAGE1AQ9HD64 81 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 MAT2BQ9NZL9 334 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 BAIAP2Q9UQB8 552 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 TTC28Q96AY4 2481 aa-0.93□□□□□ -2.56
SSB-208ENST00000468600 FUOMA2VDF0 154 aa-0.94□□□□□ -2.56
SSB-208ENST00000468600 GOLGA8RI6L899 631 aa-0.94□□□□□ -2.56
SSB-208ENST00000468600 ARL6IP5O75915 188 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms