RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 HRASP01112 189 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 IGLV1-40P01703 118 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 PSMB8P28062 276 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 FXYD3Q14802 87 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 PRSS8Q16651 343 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 CXorf66Q5JRM2 361 aaPredicted RBP15.69■□□□□ 0.1
NPHP4-206ENST00000468253 AADACL3Q5VUY0 350 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 SPAG16Q8N0X2 631 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 POC5Q8NA72 575 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 VSTM2AQ8TAG5 236 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 RSRP1Q9BUV0 290 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 CMYA5Q8N3K9 4069 aa15.69■□□□□ 0.1
NPHP4-206ENST00000468253 DPPA5A6NC42 116 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 G3V318 75 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 M0QYG6 137 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 TNFSF12O43508 249 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 CREBL2O60519 120 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-206ENST00000468253 CNIH1O95406 144 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 TSPAN15O95858 294 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 S100GP29377 79 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 CDX1P47902 265 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-206ENST00000468253 RPL23AP62750 156 aaKnown RBP15.68■□□□□ 0.1
NPHP4-206ENST00000468253 NDPQ00604 133 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 PJVKQ0ZLH3 352 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 MEF2DQ14814 521 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 MRGPRG-AS1Q2M3A8 158 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 RNASE12Q5GAN4 147 aaKnown RBP15.68■□□□□ 0.1
NPHP4-206ENST00000468253 HIST2H2BDQ6DRA6 164 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 STEAP1BQ6NZ63 245 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 LHFPL1Q86WI0 220 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 SLC38A6Q8IZM9 456 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 CADM3Q8N126 398 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 TERB2Q8NHR7 220 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 R3HDM4Q96D70 268 aa15.68■□□□□ 0.1
NPHP4-206ENST00000468253 TINAGL1Q9GZM7 467 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-206ENST00000468253 FAM212BQ9NTI7 297 aaPredicted RBP15.68■□□□□ 0.1
NPHP4-206ENST00000468253 TET2Q6N021 2002 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-206ENST00000468253 ARPC1BO15143 372 aaKnown RBP15.67■□□□□ 0.1
NPHP4-206ENST00000468253 RAB3DO95716 219 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 HPRT1P00492 218 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 MMD2Q8IY49 270 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 FAM110DQ8TAY7 271 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-206ENST00000468253 ARPC1AQ92747 370 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 ZNF486Q96H40 463 aaPredicted RBP15.67■□□□□ 0.1
NPHP4-206ENST00000468253 RHOVQ96L33 236 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 GPHA2Q96T91 129 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 FXYD6Q9H0Q3 95 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 PLEKHA2Q9HB19 425 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 TPSG1Q9NRR2 321 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 FBXO7Q9Y3I1 522 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 PLXNB1O43157 2135 aa15.67■□□□□ 0.1
NPHP4-206ENST00000468253 OR2A4O95047 310 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 F2RP25116 425 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 ETV6P41212 452 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 TAS2R31P59538 309 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 SSBP2P81877 361 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-206ENST00000468253 POU2AF1Q16633 256 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 OR2B11Q5JQS5 317 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 TMEM65Q6PI78 240 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 CCDC190Q86UF4 302 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 PUSL1Q8N0Z8 303 aaKnown RBP15.66■□□□□ 0.1
NPHP4-206ENST00000468253 WFDC9Q8NEX5 89 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 OR5M8Q8NGP6 311 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 MYOZ3Q8TDC0 251 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 OR2A7Q96R45 310 aa15.66■□□□□ 0.1
NPHP4-206ENST00000468253 FOXA2Q9Y261 457 aaPredicted RBP15.66■□□□□ 0.1
NPHP4-206ENST00000468253 RAMP3O60896 148 aa15.65■□□□□ 0.1
NPHP4-206ENST00000468253 BRI3O95415 125 aa15.65■□□□□ 0.1
NPHP4-206ENST00000468253 RPLP1P05386 114 aaKnown RBP15.65■□□□□ 0.1
NPHP4-206ENST00000468253 SAA1P0DJI8 122 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-206ENST00000468253 NQO2P16083 231 aa15.65■□□□□ 0.1
NPHP4-206ENST00000468253 MAS1LP35410 378 aa15.65■□□□□ 0.1
NPHP4-206ENST00000468253 LFNGQ8NES3 379 aa15.65■□□□□ 0.1
NPHP4-206ENST00000468253 OR4A5Q8NH83 315 aa15.65■□□□□ 0.1
NPHP4-206ENST00000468253 TMEM167AQ8TBQ9 72 aa15.65■□□□□ 0.1
NPHP4-206ENST00000468253 THAP7Q9BT49 309 aaPredicted RBP15.65■□□□□ 0.1
NPHP4-206ENST00000468253 A0A1W2PRX2 142 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 ANKRD20A5PA0PJZ0 165 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 IL6RP08887 468 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-206ENST00000468253 FGF2P09038 288 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 ZNF735P0CB33 412 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 AKAIN1P0CW23 69 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 CD40LGP29965 261 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 ECI1P42126 302 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 RAB9AP51151 201 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 RND3P61587 244 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 KIAA0141Q14154 515 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-206ENST00000468253 UNQ5815/PRO19632Q6UWF5 114 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 ZNF695Q8IW36 515 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 OR4D10Q8NGI6 311 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 OR51H1Q8NH63 302 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 ZFAND1Q8TCF1 268 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 ABHD5Q8WTS1 349 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 UBE2E2Q96LR5 201 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 ZNF430Q9H8G1 570 aaPredicted RBP15.64■□□□□ 0.09
NPHP4-206ENST00000468253 BET1LQ9NYM9 111 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 COMMD9Q9P000 198 aa15.64■□□□□ 0.09
NPHP4-206ENST00000468253 DISC1C4P0D8 188 aa15.63■□□□□ 0.09
NPHP4-206ENST00000468253 ACTL6BO94805 426 aa15.63■□□□□ 0.09
NPHP4-206ENST00000468253 KHDC1LQ5JSQ8 128 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms