RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TNFRSF9Q07011 255 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 ZNF767PQ75MW2 155 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 OR2C3Q8N628 320 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 KIR3DL3Q8N743 410 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 LPAR2Q9HBW0 351 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 DHRS7BQ6IAN0 325 aaPredicted RBP16.69■□□□□ 0.26
TMEM53-207ENST00000468117 C1orf122Q6ZSJ8 110 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 VMO1Q7Z5L0 202 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 PDZD9Q8IXQ8 264 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 LYRM2Q9NU23 88 aaPredicted RBP16.69■□□□□ 0.26
TMEM53-207ENST00000468117 HSPB7Q9UBY9 170 aa16.69■□□□□ 0.26
TMEM53-207ENST00000468117 TRAV3A0A0B4J244 114 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 FAM90A26D6RGX4 464 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 GPR137BO60478 399 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 ARG1P05089 322 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 IAPPP10997 89 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 NHLH2Q02577 135 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 HCP5Q6MZN7 132 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 OR11H6Q8NGC7 330 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 BSCL2Q96G97 398 aaPredicted RBP16.68■□□□□ 0.26
TMEM53-207ENST00000468117 SMIM3Q9BZL3 60 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 KPTNQ9Y664 436 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 NAV2Q8IVL1 2488 aa16.68■□□□□ 0.26
TMEM53-207ENST00000468117 SRRM4A7MD48 611 aaKnown RBP16.67■□□□□ 0.26
TMEM53-207ENST00000468117 H3BP45 60 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 FOXH1O75593 365 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 HRASP01112 189 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 MMP9P14780 707 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 UBE2KP61086 200 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 LDLRAD2Q5SZI1 272 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 GPR157Q5UAW9 335 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 OR4A47Q6IF82 309 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 ST8SIA2Q92186 375 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 RAB40CQ96S21 281 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 QTRT1Q9BXR0 403 aaKnown RBP16.67■□□□□ 0.26
TMEM53-207ENST00000468117 CYTL1Q9NRR1 136 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 IGSF23A1L1A6 192 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 IFNA7P01567 189 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 TAGLNQ01995 201 aaKnown RBP16.67■□□□□ 0.26
TMEM53-207ENST00000468117 OR4A16Q8NH70 328 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 PCGF1Q9BSM1 259 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 SIRPDQ9H106 197 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 RBKSQ9H477 322 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 FBXL17Q9UF56 701 aa16.67■□□□□ 0.26
TMEM53-207ENST00000468117 AMMECR1Q9Y4X0 333 aaPredicted RBP16.67■□□□□ 0.26
TMEM53-207ENST00000468117 CELSR1Q9NYQ6 3014 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 IGHV3-72A0A0B4J1Y9 119 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 FAM90A9PA6NNJ1 464 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 SHOXO15266 292 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 RRASP10301 218 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 RELBQ01201 579 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 EWSR1Q01844 656 aaKnown RBP eCLIP16.66■□□□□ 0.26
TMEM53-207ENST00000468117 ALKAL2Q6UX46 152 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 LHX4Q969G2 390 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 MARVELD3Q96A59 401 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 PSMG3-AS1Q96PY0 264 aa16.66■□□□□ 0.26
TMEM53-207ENST00000468117 UNKLQ9H9P5 680 aaKnown RBP16.66■□□□□ 0.26
TMEM53-207ENST00000468117 A0A1W2PRD5 423 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 A0A1W2PRF3 423 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 A0A1W2PRM7 423 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 UBA52P62987 128 aaKnown RBP16.65■□□□□ 0.26
TMEM53-207ENST00000468117 POU2AF1Q16633 256 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 SPINK9Q5DT21 86 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 HIST2H2BCQ6DN03 193 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 PDPNQ86YL7 162 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 TMEM252Q8N6L7 170 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 OSR1Q8TAX0 266 aaPredicted RBP16.65■□□□□ 0.26
TMEM53-207ENST00000468117 RPEQ96AT9 228 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 FLYWCH2Q96CP2 140 aaKnown RBP16.65■□□□□ 0.26
TMEM53-207ENST00000468117 HARBI1Q96MB7 349 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 WASHC3Q9Y3C0 194 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 WSB1Q9Y6I7 421 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 IGHV1-3A0A0C4DH29 117 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 LY6LH3BQJ8 138 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 GAPDHP04406 335 aaKnown RBP16.65■□□□□ 0.26
TMEM53-207ENST00000468117 RPL23AP62750 156 aaKnown RBP16.65■□□□□ 0.26
TMEM53-207ENST00000468117 OR4C13Q8NGP0 309 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 ZDHHC16Q969W1 377 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 UBQLN2Q9UHD9 624 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 INSIG2Q9Y5U4 225 aa16.65■□□□□ 0.26
TMEM53-207ENST00000468117 CSMD1Q96PZ7 3565 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 ODF3BA8MYP8 253 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 RNASEK-C17orf49H0YIS7 233 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 TOX4O94842 621 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 HTR1DP28221 377 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 ARHGDIBP52566 201 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 CLEC12BQ2HXU8 276 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 TMEM177Q53S58 311 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 PSENENQ9NZ42 101 aa16.64■□□□□ 0.25
TMEM53-207ENST00000468117 TAAR5O14804 337 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 MED6O75586 246 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 CST7O76096 145 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 HOXB4P17483 251 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-207ENST00000468117 RAB13P51153 203 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 DVL1P1P54792 670 aaPredicted RBP16.63■□□□□ 0.25
TMEM53-207ENST00000468117 DSCR9P59020 149 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 RPL7L1Q6DKI1 246 aaKnown RBP16.63■□□□□ 0.25
TMEM53-207ENST00000468117 LHFPL4Q7Z7J7 247 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 MOB3BQ86TA1 216 aa16.63■□□□□ 0.25
TMEM53-207ENST00000468117 OR8H3Q8N146 312 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms