RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 ZNF585BQ52M93 769 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 TMEM128Q5BJH2 165 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 SLC25A42Q86VD7 318 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 FAM71E2Q8N5Q1 922 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 GALNT14Q96FL9 552 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 TP53RKQ96S44 253 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 RASL11BQ9BPW5 248 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 AIFM2Q9BRQ8 373 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 C20orf85Q9H1P6 137 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 COMMD9Q9P000 198 aa13.59□□□□□ -0.23
VARS2-204ENST00000467717 ARPC1BO15143 372 aaKnown RBP13.58□□□□□ -0.24
VARS2-204ENST00000467717 S1PR2O95136 353 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 OR5AC1P0C628 307 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 RPA2P15927 270 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 NQO2P16083 231 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 UBE2MP61081 183 aaKnown RBP13.58□□□□□ -0.24
VARS2-204ENST00000467717 UBE2KP61086 200 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 BLCAPP62952 87 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 DHODHQ02127 395 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 C5orf64Q2M2E5 130 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 SP6Q3SY56 376 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 VMA21Q3ZAQ7 101 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 NRARPQ7Z6K4 114 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 DUSP18Q8NEJ0 188 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 RANBP3Q9H6Z4 567 aaPredicted RBP13.58□□□□□ -0.24
VARS2-204ENST00000467717 NUDT15Q9NV35 164 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 METTL1Q9UBP6 276 aaKnown RBP13.58□□□□□ -0.24
VARS2-204ENST00000467717 NUBP2Q9Y5Y2 271 aa13.58□□□□□ -0.24
VARS2-204ENST00000467717 SLC25A17O43808 307 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 ANXA3P12429 323 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 UCP1P25874 307 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 SUPT4H1P63272 117 aaKnown RBP13.57□□□□□ -0.24
VARS2-204ENST00000467717 PLGLAQ15195 96 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 TRIM16LQ309B1 348 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 TEX45Q8NA69 505 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 RHOVQ96L33 236 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 PRSS22Q9GZN4 317 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 TMEM222Q9H0R3 208 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 FBXL15Q9H469 300 aa13.57□□□□□ -0.24
VARS2-204ENST00000467717 TRAV6A0A075B6T7 132 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 TSPAN9O75954 239 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 CRYGBP07316 175 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 H2AFB2P0C5Z0 115 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 SAA1P0DJI8 122 aaPredicted RBP13.56□□□□□ -0.24
VARS2-204ENST00000467717 ANXA7P20073 488 aaKnown RBP13.56□□□□□ -0.24
VARS2-204ENST00000467717 VAMP1P23763 118 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 PPP1R1AQ13522 171 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 POU2AF1Q16633 256 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 LIN54Q6MZP7 749 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 VKORC1L1Q8N0U8 176 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 GLYATL2Q8WU03 294 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 R3HDM4Q96D70 268 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 ALX4Q9H161 411 aaPredicted RBP13.56□□□□□ -0.24
VARS2-204ENST00000467717 SIGLEC9Q9Y336 463 aa13.56□□□□□ -0.24
VARS2-204ENST00000467717 SH2D7A6NKC9 451 aaPredicted RBP13.55□□□□□ -0.24
VARS2-204ENST00000467717 MARCH11A6NNE9 402 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 ATG12O94817 140 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 OR2A4O95047 310 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 NDUFA7O95182 113 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 CDS2O95674 445 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 PTTG1O95997 202 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 KRASP01116 189 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 HLA-DRB1P01911 266 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 ERVK-16P61578 105 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 RELBQ01201 579 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 TMEM187Q14656 261 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 PLET1Q6UQ28 207 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 Q6ZSV7 163 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 PPP1R27Q86WC6 154 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 OR2A7Q96R45 310 aa13.55□□□□□ -0.24
VARS2-204ENST00000467717 SFT2D2O95562 160 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 IGKV1-39P01597 117 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 IGKV1D-39P04432 117 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 OR4E1P0C645 316 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 MECP2P51608 486 aaKnown RBP13.54□□□□□ -0.24
VARS2-204ENST00000467717 SRPXP78539 464 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 C4orf46Q504U0 113 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 C9orf152Q5JTZ5 239 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 OR4A47Q6IF82 309 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 PUSL1Q8N0Z8 303 aaKnown RBP13.54□□□□□ -0.24
VARS2-204ENST00000467717 CADM3Q8N126 398 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 Q8N2B8 174 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.54□□□□□ -0.24
VARS2-204ENST00000467717 DMBX1Q8NFW5 382 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 TMEM56Q96MV1 263 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 ZNF702PQ9H963 129 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 TPSG1Q9NRR2 321 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 TMEM140Q9NV12 185 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 TMEM56-RWDD3S4R434 201 aa13.54□□□□□ -0.24
VARS2-204ENST00000467717 PIGBOS1A0A0B4J2F0 54 aa13.53□□□□□ -0.24
VARS2-204ENST00000467717 C9orf170A2RU37 121 aa13.53□□□□□ -0.24
VARS2-204ENST00000467717 FCN1O00602 326 aa13.53□□□□□ -0.24
VARS2-204ENST00000467717 CREBL2O60519 120 aaPredicted RBP13.53□□□□□ -0.24
VARS2-204ENST00000467717 HLA-AP01891 365 aaKnown RBP13.53□□□□□ -0.24
VARS2-204ENST00000467717 HKR1P10072 659 aa13.53□□□□□ -0.24
VARS2-204ENST00000467717 G6PCP35575 357 aa13.53□□□□□ -0.24
VARS2-204ENST00000467717 RAG2P55895 527 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms