RNA–Protein interactions for RNA: ENST00000467213.5

CHD1L-205, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best)

Gene CHD1L, Length 2,782 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-205ENST00000467213 TNFSF15O95150 251 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 HAND1O96004 215 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 IGHV3-9P01782 118 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 CBLN1P23435 193 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 VDAC2P45880 294 aaPredicted RBP12.96□□□□□ -0.33
CHD1L-205ENST00000467213 CYB561P49447 251 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 CX3CL1P78423 397 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 HTD2P86397 168 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 TLE1Q04724 770 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 PPP1R32Q7Z5V6 425 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 BAGE3Q86Y29 109 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 BAGE2Q86Y30 109 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 TUSC5Q8IXB3 177 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 NINJ1Q92982 152 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 LRFN3Q9BTN0 628 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 PHF7Q9BWX1 381 aaPredicted RBP12.96□□□□□ -0.33
CHD1L-205ENST00000467213 V9GYV3 84 aa12.96□□□□□ -0.33
CHD1L-205ENST00000467213 SCO2A0A1W2PP80 73 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 GCHFRP30047 84 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 UBE2G2P60604 165 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 ESPL1Q14674 2120 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 TDRG1Q3Y452 100 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 C19orf35Q6ZS72 473 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 EAF1Q96JC9 268 aaPredicted RBP12.96□□□□□ -0.34
CHD1L-205ENST00000467213 FAM173AQ9BQD7 235 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 OSTCQ9NRP0 149 aa12.96□□□□□ -0.34
CHD1L-205ENST00000467213 C20orf202A1L168 122 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 FAM166BA8MTA8 275 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 K7EN84 100 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 FCN1O00602 326 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 HBZP02008 142 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 SELEP16581 610 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 CDKN1AP38936 164 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 RHOBP62745 196 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 LRP11Q86VZ4 500 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 OR2M7Q8NG81 312 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 VN1R17PQ8TDU5 208 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 MGST2Q99735 147 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 SAMD10Q9BYL1 202 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 PAM16Q9Y3D7 125 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 ZNF407Q9C0G0 2248 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 ZNF253O75346 499 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 TDGF1P13385 188 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 EGR1P18146 543 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 RAB7AP51149 207 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 Q0VFX4 171 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 HLA-DRB5Q30154 266 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 RASL11AQ6T310 242 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 MMD2Q8IY49 270 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 KLHDC1Q8N7A1 406 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 KCNS1Q96KK3 526 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 B4GALT7Q9UBV7 327 aa12.95□□□□□ -0.34
CHD1L-205ENST00000467213 A6NNC1 897 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 IQCF6A8MYZ5 107 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 ADH4P08319 380 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 RPL31P62899 125 aaKnown RBP12.94□□□□□ -0.34
CHD1L-205ENST00000467213 KRTCAP3Q53RY4 240 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 ARL6IP6Q8N6S5 226 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 NPVFQ9HCQ7 196 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 FBXL7Q9UJT9 491 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 MYO9BQ13459 2157 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 EDDM3BP56851 147 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 PSG7Q13046 419 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 IFI44Q8TCB0 444 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 BCL2L2Q92843 193 aaPredicted RBP12.94□□□□□ -0.34
CHD1L-205ENST00000467213 OPN3Q9H1Y3 402 aaPredicted RBP12.94□□□□□ -0.34
CHD1L-205ENST00000467213 MRPL27Q9P0M9 148 aaKnown RBP12.94□□□□□ -0.34
CHD1L-205ENST00000467213 MRPS16Q9Y3D3 137 aaKnown RBP12.94□□□□□ -0.34
CHD1L-205ENST00000467213 YTHDF2Q9Y5A9 579 aaKnown RBP12.94□□□□□ -0.34
CHD1L-205ENST00000467213 CACNA1EQ15878 2313 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 ARHGAP21Q5T5U3 1957 aa12.94□□□□□ -0.34
CHD1L-205ENST00000467213 PINLYPA6NC86 204 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 PGPEP1LA6NFU8 196 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 DIRC3C9JPN6 131 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 PLA2G5P39877 138 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 FOXG1P55316 489 aaPredicted RBP12.93□□□□□ -0.34
CHD1L-205ENST00000467213 SUMO1P63165 101 aaKnown RBP12.93□□□□□ -0.34
CHD1L-205ENST00000467213 OR5I1Q13606 314 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 HLA-BQ31612 363 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 OR5B3Q8NH48 314 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 SPTBN5Q9NRC6 3674 aaKnown RBP12.93□□□□□ -0.34
CHD1L-205ENST00000467213 SNURFLB1AK76 121 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 MT-CO3P00414 261 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 IGLC3P0DOY3 106 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 PRRX1P54821 245 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 GCSAMLQ5JQS6 135 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 CORO2AQ92828 525 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 ASCL3Q9NQ33 180 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 PRUNE2Q8WUY3 3088 aa12.93□□□□□ -0.34
CHD1L-205ENST00000467213 CABIN1Q9Y6J0 2220 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 K7ESF4 209 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 HLA-DQA1P01909 254 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 KIR2DS2P43631 304 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 MRPL49Q13405 166 aaKnown RBP12.92□□□□□ -0.34
CHD1L-205ENST00000467213 SSPNQ14714 243 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 RTL8BQ17RB0 113 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 TBC1D28Q2M2D7 210 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 MORN2Q502X0 79 aa12.92□□□□□ -0.34
CHD1L-205ENST00000467213 MYPOPQ86VE0 399 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms