RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 HEYLQ9NQ87 328 aaPredicted RBP8.63□□□□□ -1.03
UFD1-206ENST00000466373 OR6C3Q9NZP0 311 aa8.63□□□□□ -1.03
UFD1-206ENST00000466373 LAMP3Q9UQV4 416 aa8.63□□□□□ -1.03
UFD1-206ENST00000466373 TIMM9Q9Y5J7 89 aa8.63□□□□□ -1.03
UFD1-206ENST00000466373 POLEQ07864 2286 aa8.63□□□□□ -1.03
UFD1-206ENST00000466373 MBD3L4A6NDZ8 208 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 MBD3L3A6NE82 208 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 MBD3L5A6NJ08 208 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 IFITM10A6NMD0 228 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 MGST3O14880 152 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 TUBG1P23258 451 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 UBE2G2P60604 165 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 FAM27E3Q08E93 113 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 ATP6V1FQ16864 119 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 TGIF2LYQ8IUE0 185 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 C1orf87Q8N0U7 546 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 MBD3L2Q8NHZ7 208 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 SDSLQ96GA7 329 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 PARD6GQ9BYG4 376 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 PATZ1Q9HBE1 687 aaKnown RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 AURKAIP1Q9NWT8 199 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 B4DEV8 164 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 RRHO14718 337 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 FABP1P07148 127 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 LOXL3P58215 753 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 PNRC1Q12796 327 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 FRZBQ92765 325 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 SNX22Q96L94 193 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 ACTR3CQ9C0K3 210 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 IFI27L2Q9H2X8 130 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 GSN-AS1Q9NRJ2 163 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 TPRP12270 2363 aaKnown RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 ZNF891A8MT65 544 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 LINC00587B1AMM8 73 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 CD1BP29016 333 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 MZT1Q08AG7 82 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 CENPVQ7Z7K6 275 aaPredicted RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 OR51G1Q8NGK1 321 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 ZNF251Q9BRH9 671 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 MRPL37Q9BZE1 423 aaKnown RBP8.62□□□□□ -1.03
UFD1-206ENST00000466373 PARLQ9H300 379 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 CALYQ9NYX4 217 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 MIOXQ9UGB7 285 aa8.62□□□□□ -1.03
UFD1-206ENST00000466373 SOX15O60248 233 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 HPRT1P00492 218 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 HOXA5P20719 270 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 TMEM241Q24JQ0 296 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 C16orf82Q7Z2V1 217 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 FAM90A1Q86YD7 464 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 PPP1R35Q8TAP8 253 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 ABHD5Q8WTS1 349 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 SNRNP40Q96DI7 357 aaKnown RBP8.61□□□□□ -1.03
UFD1-206ENST00000466373 S1PR3Q99500 378 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 TUBG2Q9NRH3 451 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 DCAF16Q9NXF7 216 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 JPT1Q9UK76 154 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 CUL9Q8IWT3 2517 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 MUC6Q6W4X9 2439 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 MBP02144 154 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 TRGC1P0CF51 173 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 MYOD1P15172 320 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 CDC34P49427 236 aaPredicted RBP8.61□□□□□ -1.03
UFD1-206ENST00000466373 GNG10P50151 68 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 ERVK-16P61578 105 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 TIMM23BQ5SRD1 257 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 TCTEX1D1Q8N7M0 179 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 TMEM204Q9BSN7 226 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 HINT2Q9BX68 163 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 TMEM140Q9NV12 185 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 ZNRD1Q9P1U0 126 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 NAT8Q9UHE5 227 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 DSCAML1Q8TD84 2053 aa8.61□□□□□ -1.03
UFD1-206ENST00000466373 LRBAP50851 2863 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 OPN1MWP04001 364 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 OPN1MW2P0DN77 364 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 OPN1MW3P0DN78 364 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 GLRXP35754 106 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 RPL23P62829 140 aaKnown RBP8.6□□□□□ -1.03
UFD1-206ENST00000466373 GNB2P62879 340 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 NKX6-1P78426 367 aaPredicted RBP8.6□□□□□ -1.03
UFD1-206ENST00000466373 BSXQ3C1V8 233 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 CST9LP1Q5W188 147 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 TRAT1Q6PIZ9 186 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 ZCCHC24Q8N2G6 241 aaKnown RBP8.6□□□□□ -1.03
UFD1-206ENST00000466373 TCEAL7Q9BRU2 100 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 GGACTQ9BVM4 153 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 ELOVL1Q9BW60 279 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 GPR61Q9BZJ8 451 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 YPEL1O60688 119 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 CEACAM4O75871 244 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 KBTBD11O94819 623 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 SOD3P08294 240 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 CDX1P47902 265 aaPredicted RBP8.6□□□□□ -1.03
UFD1-206ENST00000466373 CT45A1Q5HYN5 189 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 CDPF1Q6NVV7 123 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 LYG1Q8N1E2 194 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 Q8N7P7 452 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 CT45A3Q8NHU0 189 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 YPEL2Q96QA6 119 aa8.6□□□□□ -1.03
UFD1-206ENST00000466373 CCL13Q99616 98 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms