RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 UBE2G2P60604 165 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 AP1S1P61966 158 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 SKP1P63208 163 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 AKR1C1Q04828 323 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 SLC38A11Q08AI6 406 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 JOSD1Q15040 202 aaPredicted RBP1.27□□□□□ -2.21
LRCH3-211ENST00000466054 TNFAIP8L2Q6P589 184 aaPredicted RBP1.27□□□□□ -2.21
LRCH3-211ENST00000466054 KCTD7Q96MP8 289 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 NMNAT3Q96T66 252 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 CCL13Q99616 98 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 VCX3BQ9H321 246 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 IMP3Q9NV31 184 aaKnown RBP1.27□□□□□ -2.21
LRCH3-211ENST00000466054 ZNHIT6Q9NWK9 470 aaKnown RBP1.27□□□□□ -2.21
LRCH3-211ENST00000466054 KIAA2026Q5HYC2 2103 aa1.27□□□□□ -2.21
LRCH3-211ENST00000466054 A0A0J9YW62 118 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 ITGB1BP1O14713 200 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 KRT75O95678 551 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 CD40LGP29965 261 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 ALDH3A1P30838 453 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 CA5AP35218 305 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 CCR2P41597 374 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 CD151P48509 253 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 CDC34P49427 236 aaPredicted RBP1.26□□□□□ -2.21
LRCH3-211ENST00000466054 MED21Q13503 144 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 NAA40Q86UY6 237 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 TMEM251Q8N6I4 163 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 OR51T1Q8NGJ9 327 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 OR1L8Q8NGR8 309 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 DNAJB3Q8WWF6 145 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 TTTY13Q9BZ97 58 aa1.26□□□□□ -2.21
LRCH3-211ENST00000466054 PTPRBP23467 1997 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 F5H768 121 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 SSNA1O43805 119 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 PGLYRP1O75594 196 aaPredicted RBP1.25□□□□□ -2.21
LRCH3-211ENST00000466054 SLCO1A2P46721 670 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 TPI1P60174 286 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 PDPK2PQ6A1A2 396 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 SBSNQ6UWP8 590 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 RASSF6Q6ZTQ3 369 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 FAM9CQ8IZT9 166 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 UBL4BQ8N7F7 174 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 HAVCR2Q8TDQ0 301 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 RAB2BQ8WUD1 216 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 GNPNAT1Q96EK6 184 aaPredicted RBP1.25□□□□□ -2.21
LRCH3-211ENST00000466054 XAGE1AQ9HD64 81 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 PLEKHJ1Q9NW61 149 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 POLR1DQ9Y2S0 133 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 TIMM9Q9Y5J7 89 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 PTPRSQ13332 1948 aa1.25□□□□□ -2.21
LRCH3-211ENST00000466054 LAMB2P55268 1798 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 GOLGA8KD6RF30 607 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 GOLGA8MH3BSY2 632 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 CREBL2O60519 120 aaPredicted RBP1.24□□□□□ -2.21
LRCH3-211ENST00000466054 HLA-DRAP01903 254 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 SERPINA7P05543 415 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 IL3P08700 152 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 LRRC75BQ2VPJ9 315 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 FAM78BQ5VT40 261 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 ZNF705AQ6ZN79 300 aaPredicted RBP1.24□□□□□ -2.21
LRCH3-211ENST00000466054 PACRGLQ8N7B6 248 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 EEF1AKMT1Q8WVE0 214 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 CMTM5Q96DZ9 223 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 TMA16Q96EY4 203 aaKnown RBP1.24□□□□□ -2.21
LRCH3-211ENST00000466054 NUMA1Q14980 2115 aa1.24□□□□□ -2.21
LRCH3-211ENST00000466054 IGHV1-18A0A0C4DH31 117 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 COX7A2LO14548 114 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 ZNF737O75373 536 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 YEATS4O95619 227 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 CASQ1P31415 396 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 HIST1H4AP62805 103 aaKnown RBP1.23□□□□□ -2.21
LRCH3-211ENST00000466054 CST9Q5W186 159 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 IMMP2LQ96T52 175 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 UPF3BQ9BZI7 483 aaKnown RBP1.23□□□□□ -2.21
LRCH3-211ENST00000466054 HRASLSQ9HDD0 168 aa1.23□□□□□ -2.21
LRCH3-211ENST00000466054 RBM7Q9Y580 266 aaKnown RBP1.23□□□□□ -2.21
LRCH3-211ENST00000466054 KIF15Q9NS87 1388 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 CCDC88CQ9P219 2028 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 RTTNQ86VV8 2226 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 TRAV7A0A075B6U4 112 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 C1orf232A0A0U1RR37 186 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 HMSDA8MTL9 139 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 H7C2G1 150 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 COCHO43405 550 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 C8orf88P0DMB2 117 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 AKR1C3P42330 323 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 TMEM155Q4W5P6 130 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 SAPCD1Q5SSQ6 148 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 C5orf46Q6UWT4 87 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 OR2T27Q8NH04 317 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 HSPB9Q9BQS6 159 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 HDHD2Q9H0R4 259 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 DKKL1Q9UK85 242 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 CPAMD8Q8IZJ3 1885 aa1.22□□□□□ -2.21
LRCH3-211ENST00000466054 MALRD1Q5VYJ5 2156 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 A0A0A6YYH2 397 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 A6NJ64 397 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 DISC1C4P0D8 188 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 PFDN6O15212 129 aa1.21□□□□□ -2.22
LRCH3-211ENST00000466054 LGALS1P09382 135 aaKnown RBP1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms