RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 DBX1A6NMT0 343 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 SRD5A1P18405 259 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 CXCL3P19876 107 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 CD1BP29016 333 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 AKR1C2P52895 323 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 GGNBP1Q5YKI7 109 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 LRTM2Q8N967 370 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 OR11H7Q8NGC8 314 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 SEC22AQ96IW7 307 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 SSX3Q99909 188 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 PLEKHA2Q9HB19 425 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 SHPKQ9UHJ6 478 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 NAV3Q8IVL0 2385 aa13.8□□□□□ -0.2
PTPRU-206ENST00000465525 C13orf42A0A1B0GVH6 325 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 BRS3P32247 399 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 EIF2B2P49770 351 aaKnown RBP13.79□□□□□ -0.2
PTPRU-206ENST00000465525 ARHGDIBP52566 201 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 TAGLNQ01995 201 aaKnown RBP13.79□□□□□ -0.2
PTPRU-206ENST00000465525 TMEM177Q53S58 311 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 DHRS7BQ6IAN0 325 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-206ENST00000465525 DMBX1Q8NFW5 382 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 WDR89Q96FK6 387 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-206ENST00000465525 EAF1Q96JC9 268 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-206ENST00000465525 ZNF48Q96MX3 618 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-206ENST00000465525 MEGF9Q9H1U4 602 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 FAM212BQ9NTI7 297 aaPredicted RBP13.79□□□□□ -0.2
PTPRU-206ENST00000465525 MARCH11A6NNE9 402 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 MOSP00540 346 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 FAM219AQ8IW50 185 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 OR4C13Q8NGP0 309 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 IL22RA2Q969J5 263 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 CHIAQ9BZP6 476 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 COMMD9Q9P000 198 aa13.79□□□□□ -0.2
PTPRU-206ENST00000465525 NSD1Q96L73 2696 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-206ENST00000465525 ANK3Q12955 4377 aaKnown RBP13.78□□□□□ -0.2
PTPRU-206ENST00000465525 C5orf51A6NDU8 294 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 H3BUX3 64 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 CRLF1O75462 422 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 IGLV2-23P01705 113 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 SULT1A3P0DMM9 295 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 SULT1A4P0DMN0 295 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 NQO2P16083 231 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 ERVK-16P61578 105 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 LY6EQ16553 131 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 LRRC75BQ2VPJ9 315 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 TMEM219Q86XT9 240 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 OR2T10Q8NGZ9 312 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 OSR1Q8TAX0 266 aaPredicted RBP13.78□□□□□ -0.2
PTPRU-206ENST00000465525 PIFOQ8TCI5 191 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 ZDHHC16Q969W1 377 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 GPR146Q96CH1 333 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 OR10C1Q96KK4 312 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 RHOVQ96L33 236 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 TNFRSF19Q9NS68 423 aa13.78□□□□□ -0.2
PTPRU-206ENST00000465525 TRAV3A0A0B4J244 114 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 HMX3A6NHT5 357 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 FAM90A9PA6NNJ1 464 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 SLC25A17O43808 307 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 CCNKO75909 580 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 HRASP01112 189 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 SAA1P0DJI8 122 aaPredicted RBP13.77□□□□□ -0.21
PTPRU-206ENST00000465525 TMEM11P17152 192 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 F2RL1P55085 397 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 OR4A47Q6IF82 309 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 H2BFWTQ7Z2G1 175 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 RRNAD1Q96FB5 475 aaKnown RBP13.77□□□□□ -0.21
PTPRU-206ENST00000465525 RAB18Q9NP72 206 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 TPSG1Q9NRR2 321 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 TMEM140Q9NV12 185 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 NSG2Q9Y328 171 aa13.77□□□□□ -0.21
PTPRU-206ENST00000465525 NXPH3O95157 252 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 IFNA21P01568 189 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 IGHV4-59P01825 116 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 FAM106CPP0CH98 169 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 VDAC1P21796 283 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 H2BFSP57053 126 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 MMDQ15546 238 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 NMSQ5H8A3 153 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 Q6ZRM9 215 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 OR5M8Q8NGP6 311 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 PRDM13Q9H4Q3 707 aa13.76□□□□□ -0.21
PTPRU-206ENST00000465525 TET2Q6N021 2002 aaPredicted RBP13.76□□□□□ -0.21
PTPRU-206ENST00000465525 OR9G9P0C7N8 305 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 OR2B8PP59922 312 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 CD83Q01151 205 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 TUSC1Q2TAM9 212 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 Q8N6K4 173 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 SIGLECL1Q8N7X8 197 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 CACNG5Q9UF02 275 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 TMED3Q9Y3Q3 217 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 MMP24Q9Y5R2 645 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 MTORP42345 2549 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 DUXBA0A1W2PPF3 345 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 ATG12O94817 140 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 P0C879 139 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 FAM157CP0CG43 387 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 CD300CQ08708 224 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 EBI3Q14213 229 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 PSG5Q15238 335 aa13.75□□□□□ -0.21
PTPRU-206ENST00000465525 AANATQ16613 207 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms