RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 MAFIPQ8WZ33 124 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 RAB3CQ96E17 227 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 CABLES2Q9BTV7 478 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 VCXQ9H320 206 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 ZNF230Q9UIE0 474 aaPredicted RBP7.34□□□□□ -1.23
USP39-212ENST00000465514 RAB22AQ9UL26 194 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 RBM7Q9Y580 266 aaKnown RBP7.34□□□□□ -1.23
USP39-212ENST00000465514 V9GY05 133 aa7.34□□□□□ -1.23
USP39-212ENST00000465514 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 A0A075B6Q4 140 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 A0A0B4J203 849 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 SHISA3A0PJX4 238 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 BMPR1BO00238 502 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 MPPED1O15442 326 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 AIREO43918 545 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 CRYZL1O95825 349 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 PRH1P02810 166 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 GNB3P16520 340 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 PSMA1P25786 263 aaKnown RBP7.33□□□□□ -1.24
USP39-212ENST00000465514 DUTP33316 252 aaKnown RBP7.33□□□□□ -1.24
USP39-212ENST00000465514 RANBP1P43487 201 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 PSMD7P51665 324 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 UBE2KP61086 200 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 RHOGP84095 191 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 ATP5G2Q06055 141 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 EXOSC2Q13868 293 aaKnown RBP7.33□□□□□ -1.24
USP39-212ENST00000465514 VMA21Q3ZAQ7 101 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 LINC00322Q6ZN03 302 aaPredicted RBP7.33□□□□□ -1.24
USP39-212ENST00000465514 IDO2Q6ZQW0 420 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 OR10R2Q8NGX6 335 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 SRSF12Q8WXF0 261 aaKnown RBP7.33□□□□□ -1.24
USP39-212ENST00000465514 DUSP21Q9H596 190 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 PLEKHA3Q9HB20 300 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 AKIP1Q9NQ31 210 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 PEMTQ9UBM1 199 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 KLK5Q9Y337 293 aaPredicted RBP7.33□□□□□ -1.24
USP39-212ENST00000465514 TPRKBQ9Y3C4 175 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 PKD1P98161 4303 aa7.33□□□□□ -1.24
USP39-212ENST00000465514 TRBV9A0A0B4J1U6 114 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 FAM223BA6NKX1 122 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 LINC00473A8K010 186 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 ZNF785A8K8V0 405 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 RGS10O43665 173 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 DIRAS3O95661 229 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 GADD45AP24522 165 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 CD81P60033 236 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 EWSR1Q01844 656 aaKnown RBP eCLIP7.32□□□□□ -1.24
USP39-212ENST00000465514 ZNF45Q02386 682 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 MLLT11Q13015 90 aaPredicted RBP7.32□□□□□ -1.24
USP39-212ENST00000465514 CD300EQ496F6 205 aaPredicted RBP7.32□□□□□ -1.24
USP39-212ENST00000465514 FAM223AQ8IWN6 122 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 H1FOOQ8IZA3 346 aaPredicted RBP7.32□□□□□ -1.24
USP39-212ENST00000465514 ACOT12Q8WYK0 555 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 ADTRPQ96IZ2 230 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 NEURL2Q9BR09 285 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 GINS4Q9BRT9 223 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 ZNF430Q9H8G1 570 aaPredicted RBP7.32□□□□□ -1.24
USP39-212ENST00000465514 ACOT13Q9NPJ3 140 aa7.32□□□□□ -1.24
USP39-212ENST00000465514 DMBT1Q9UGM3 2413 aaPredicted RBP7.32□□□□□ -1.24
USP39-212ENST00000465514 IGKV1D-8A0A087WSZ0 117 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.31□□□□□ -1.24
USP39-212ENST00000465514 J3QRK9 145 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 RAB27BO00194 218 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 MFNGO00587 321 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 TUSC2O75896 110 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 TPPPO94811 219 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 HIST1H1DP16402 221 aaKnown RBP7.31□□□□□ -1.24
USP39-212ENST00000465514 TALDO1P37837 337 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 MAP2K4P45985 399 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 OR10A3P58181 314 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 ARFRP1Q13795 201 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 TTC9CQ8N5M4 171 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 DEFB125Q8N687 156 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 OSR1Q8TAX0 266 aaPredicted RBP7.31□□□□□ -1.24
USP39-212ENST00000465514 MGLLQ99685 303 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 SPIN2AQ99865 258 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 SPIN2BQ9BPZ2 258 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 CCDC90BQ9GZT6 254 aa7.31□□□□□ -1.24
USP39-212ENST00000465514 IFITM5A6NNB3 132 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 PPP5D1E7EU14 171 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 PDCD5O14737 125 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 FCGR3BO75015 233 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 OR2J3O76001 311 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 ACTL6BO94805 426 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 CD7P09564 240 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 SAA1P0DJI8 122 aaPredicted RBP7.3□□□□□ -1.24
USP39-212ENST00000465514 RAB6AP20340 208 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 EDN2P20800 178 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 AQP4P55087 323 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 CDK10Q15131 360 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 GUCA2BQ16661 112 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 DEFB114Q30KQ6 69 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 C15orf32Q32M92 178 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 C10orf55Q5SWW7 151 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 Q6ZS49 121 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 LINC00336Q6ZUF6 198 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 LAX1Q8IWV1 398 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 MMD2Q8IY49 270 aa7.3□□□□□ -1.24
USP39-212ENST00000465514 NECAP1Q8NC96 275 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms