RNA–Protein interactions for RNA: ENST00000465213.1

VPS8-217, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 656 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-217ENST00000465213 TBX21Q9UL17 535 aa3.12□□□□□ -1.91
VPS8-217ENST00000465213 ANAPC10Q9UM13 185 aa3.12□□□□□ -1.91
VPS8-217ENST00000465213 LAMTOR2Q9Y2Q5 125 aa3.12□□□□□ -1.91
VPS8-217ENST00000465213 C2orf16Q68DN1 1984 aa3.12□□□□□ -1.91
VPS8-217ENST00000465213 TNS3Q68CZ2 1445 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 YLPM1P49750 1951 aaKnown RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 A0A087WUU8 490 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 TMED7-TICAM2A0A0A6YYA0 188 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 IGHV3-74A0A0B4J1X5 117 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 TRAV4A0A0B4J268 109 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 IGHV3-35A0A0C4DH35 117 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 ZNF705GA8MUZ8 300 aaPredicted RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 C9JQL5 133 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 KRTAP4-16G5E9R7 235 aaPredicted RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 MRASO14807 208 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 DEDDO75618 318 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 CDS2O95674 445 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 HLA-DPB1P04440 258 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 ZNF30P17039 623 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 RPL7P18124 248 aaKnown RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 IMPA1P29218 277 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 PPP1CAP62136 330 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 HERVK_113P63121 156 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 GNA12Q03113 381 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 ENDOGQ14249 297 aaKnown RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 HIGD2BQ4VC39 106 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 IL34Q6ZMJ4 242 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 FAM19A3Q7Z5A8 133 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 DEFB128Q7Z7B8 93 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 TMEM229BQ8NBD8 167 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 OR52P1PQ8NH57 321 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 ARL11Q969Q4 196 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 ISOC1Q96CN7 298 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 GNPNAT1Q96EK6 184 aaPredicted RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 ZNF471Q9BX82 626 aaPredicted RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 PTGES2Q9H7Z7 377 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 PDFQ9HBH1 243 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 POPDC3Q9HBV1 291 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 KCNIP2Q9NS61 270 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 SLC23A2Q9UGH3 650 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 AK3Q9UIJ7 227 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 ERG28Q9UKR5 140 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 A0A0C4DFX4 3053 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 DYSFO75923 2080 aa3.11□□□□□ -1.91
VPS8-217ENST00000465213 BAZ2AQ9UIF9 1905 aaKnown RBP3.11□□□□□ -1.91
VPS8-217ENST00000465213 RGS12O14924 1447 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 ATRNO75882 1429 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 PDS5BQ9NTI5 1447 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 CHD2O14647 1828 aaKnown RBP3.1□□□□□ -1.91
VPS8-217ENST00000465213 TRAV19A0A0A6YYK7 116 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 A0A0J9YY10 115 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 A0A1B0GX78 115 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 DUXBA0A1W2PPF3 345 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 ZNF207O43670 478 aaKnown RBP3.1□□□□□ -1.91
VPS8-217ENST00000465213 GSTZ1O43708 216 aaPredicted RBP3.1□□□□□ -1.91
VPS8-217ENST00000465213 HLA-DQB2P05538 268 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 TAS2R30P59541 319 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 NCS1P62166 190 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 REG3AQ06141 175 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 PLCXD2Q0VAA5 305 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 DHRS2Q13268 280 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 MMDQ15546 238 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 C15orf32Q32M92 178 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 TMEM69Q5SWH9 247 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 PRNTQ86SH4 94 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 SLC25A42Q86VD7 318 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 BAP18Q8IXM2 172 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 ZNF664Q8N3J9 261 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 OR51T1Q8NGJ9 327 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 OR1J4Q8NGS1 313 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 OR13C8Q8NGS7 320 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 ITLN1Q8WWA0 313 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 RTN4IP1Q8WWV3 396 aaPredicted RBP3.1□□□□□ -1.91
VPS8-217ENST00000465213 ACOT12Q8WYK0 555 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 PHYHIPLQ96FC7 376 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 C1orf147Q96MC9 270 aaPredicted RBP3.1□□□□□ -1.91
VPS8-217ENST00000465213 OR2A5Q96R48 311 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 TIMM17AQ99595 171 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 RTL8AQ9BWD3 113 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 LINC00470Q9BZP3 86 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 IMUPQ9GZP8 106 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 MED28Q9H204 178 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 OR2D2Q9H210 308 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 PLEKHF2Q9H8W4 249 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 TVP23BQ9NYZ1 205 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 NUFIP1Q9UHK0 495 aaKnown RBP3.1□□□□□ -1.91
VPS8-217ENST00000465213 MYH2Q9UKX2 1941 aa3.1□□□□□ -1.91
VPS8-217ENST00000465213 KMT2BQ9UMN6 2715 aaPredicted RBP3.09□□□□□ -1.91
VPS8-217ENST00000465213 CHD5Q8TDI0 1954 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 DOCK3Q8IZD9 2030 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 WDR97A6NE52 1622 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 TMEM72A0PK05 275 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 A8MU10 97 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 KRBOX1C9JBD0 128 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 TRAF3IP2O43734 574 aaPredicted RBP3.09□□□□□ -1.91
VPS8-217ENST00000465213 SERF1AO75920 110 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 FSTL3O95633 263 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 IGLV3-27P01718 113 aa3.09□□□□□ -1.91
VPS8-217ENST00000465213 SMIM10L2AP0DMW4 78 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms