RNA–Protein interactions for RNA: ENST00000465209.1

COL11A1-207, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-207ENST00000465209 TMEM203Q969S6 136 aa8.19□□□□□ -1.1
COL11A1-207ENST00000465209 FAM3DQ96BQ1 224 aa8.19□□□□□ -1.1
COL11A1-207ENST00000465209 KCTD12Q96CX2 325 aaKnown RBP8.19□□□□□ -1.1
COL11A1-207ENST00000465209 CCDC140Q96MF4 163 aa8.19□□□□□ -1.1
COL11A1-207ENST00000465209 OVOL2Q9BRP0 275 aa8.19□□□□□ -1.1
COL11A1-207ENST00000465209 KLK9Q9UKQ9 250 aa8.19□□□□□ -1.1
COL11A1-207ENST00000465209 TMEM213A2RRL7 107 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 A8MWP6 167 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 E7EUB6 86 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 RAB27BO00194 218 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 CASQ2O14958 399 aaPredicted RBP8.18□□□□□ -1.1
COL11A1-207ENST00000465209 DENRO43583 198 aaKnown RBP8.18□□□□□ -1.1
COL11A1-207ENST00000465209 IGLV2-14P01704 120 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 EWSR1Q01844 656 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL11A1-207ENST00000465209 ATP5G2Q06055 141 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 TPBGQ13641 420 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 CDK10Q15131 360 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 MED22Q15528 200 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 Q6ZS49 121 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 TMEM61Q8N0U2 210 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 NECAP1Q8NC96 275 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 DYNLRB2Q8TF09 96 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 ACOT12Q8WYK0 555 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 UFD1Q92890 307 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 ADTRPQ96IZ2 230 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 FANCD2OSQ96PS1 177 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 TECRQ9NZ01 308 aaKnown RBP8.18□□□□□ -1.1
COL11A1-207ENST00000465209 MLXQ9UH92 298 aa8.18□□□□□ -1.1
COL11A1-207ENST00000465209 KIAA1109Q2LD37 5005 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 MPPED1O15442 326 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 TUSC2O75896 110 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 OR2J3O76001 311 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 IL6RP08887 468 aaPredicted RBP8.17□□□□□ -1.1
COL11A1-207ENST00000465209 GNB3P16520 340 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 BRWD1-AS2P59051 145 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 RPL30P62888 115 aaKnown RBP8.17□□□□□ -1.1
COL11A1-207ENST00000465209 FABP5Q01469 135 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 CBX3Q13185 183 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 EIF4EBP1Q13541 118 aaPredicted RBP8.17□□□□□ -1.1
COL11A1-207ENST00000465209 GPHB5Q86YW7 130 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 SPIN2AQ99865 258 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 SPIN2BQ9BPZ2 258 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 ZNF257Q9Y2Q1 563 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 SELENOKQ9Y6D0 94 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
COL11A1-207ENST00000465209 HMX3A6NHT5 357 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 NPIPB5A8MRT5 1133 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 PTGES3LE9PB15 166 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 GGCTO75223 188 aaKnown RBP8.16□□□□□ -1.1
COL11A1-207ENST00000465209 OR2C1O95371 312 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 CRYGCP07315 174 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 ZNF735P0CB33 412 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 HIST1H1DP16402 221 aaKnown RBP8.16□□□□□ -1.1
COL11A1-207ENST00000465209 CBLN1P23435 193 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 CALRP27797 417 aaKnown RBP8.16□□□□□ -1.1
COL11A1-207ENST00000465209 RCN1Q15293 331 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 GUCA2BQ16661 112 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 FAM209BQ5JX69 171 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 HES5Q5TA89 166 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 WFDC3Q8IUB2 231 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 MMD2Q8IY49 270 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 PUSL1Q8N0Z8 303 aaKnown RBP8.16□□□□□ -1.1
COL11A1-207ENST00000465209 ZNF645Q8N7E2 425 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 OR10R2Q8NGX6 335 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 RAB3CQ96E17 227 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 DNAH2Q9P225 4427 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 ELF5Q9UKW6 265 aaPredicted RBP8.16□□□□□ -1.1
COL11A1-207ENST00000465209 RAB22AQ9UL26 194 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 V9GY05 133 aa8.16□□□□□ -1.1
COL11A1-207ENST00000465209 PKHD1P08F94 4074 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 CGB1A6NKQ9 187 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 CREBL2O60519 120 aaPredicted RBP8.15□□□□□ -1.1
COL11A1-207ENST00000465209 ARL6IP5O75915 188 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 NDUFB8O95169 186 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 IGHV3-23P01764 117 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 OR10A3P58181 314 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 MLLT11Q13015 90 aaPredicted RBP8.15□□□□□ -1.1
COL11A1-207ENST00000465209 TRAM1Q15629 374 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 VKORC1L1Q8N0U8 176 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 GINS4Q9BRT9 223 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 GGTLC1Q9BX51 225 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 DUSP21Q9H596 190 aa8.15□□□□□ -1.1
COL11A1-207ENST00000465209 IGKV1D-13A0A0B4J2D9 117 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 A0A0J9YWU9 116 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 FCGR3BO75015 233 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 KBTBD11O94819 623 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 LY6G6CO95867 125 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 HLA-DQB1P01920 261 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 C8orf88P0DMB2 117 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 IGKV1-13P0DP09 117 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 AREGP15514 252 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 CTRB1P17538 263 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 RAB6AP20340 208 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 PSMA1P25786 263 aaKnown RBP8.14□□□□□ -1.11
COL11A1-207ENST00000465209 ARL3P36405 182 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 TNFRSF9Q07011 255 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 ZNF57Q68EA5 555 aaPredicted RBP8.14□□□□□ -1.11
COL11A1-207ENST00000465209 CTRB2Q6GPI1 263 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 UNQ9165/PRO28630Q6UXU0 137 aa8.14□□□□□ -1.11
COL11A1-207ENST00000465209 KCTD9Q7L273 389 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms