RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MRPS15P82914 257 aaKnown RBP12.95□□□□□ -0.34
HMGN1-210ENST00000464078 SLC25A42Q86VD7 318 aa12.95□□□□□ -0.34
HMGN1-210ENST00000464078 GPHB5Q86YW7 130 aa12.95□□□□□ -0.34
HMGN1-210ENST00000464078 TMEM61Q8N0U2 210 aa12.95□□□□□ -0.34
HMGN1-210ENST00000464078 FAM3DQ96BQ1 224 aa12.95□□□□□ -0.34
HMGN1-210ENST00000464078 DENRO43583 198 aaKnown RBP12.94□□□□□ -0.34
HMGN1-210ENST00000464078 ARL6IP5O75915 188 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 LY6G6CO95867 125 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 CBLN1P23435 193 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 MAP2K4P45985 399 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 C10orf55Q5SWW7 151 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 TMEM91Q6ZNR0 172 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 RAB3CQ96E17 227 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 CENPOQ9BU64 300 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 ST6GALNAC5Q9BVH7 336 aa12.94□□□□□ -0.34
HMGN1-210ENST00000464078 AK6Q9Y3D8 172 aaKnown RBP12.94□□□□□ -0.34
HMGN1-210ENST00000464078 TMEM213A2RRL7 107 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 NPIPB5A8MRT5 1133 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 OR2J3O76001 311 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 OR2C1O95371 312 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 HLA-AP01891 365 aaKnown RBP12.93□□□□□ -0.34
HMGN1-210ENST00000464078 CLDN12P56749 244 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 KLK9Q2XQG4 91 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 Q6ZS49 121 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 H1FOOQ8IZA3 346 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-210ENST00000464078 CACNG8Q8WXS5 425 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 UFD1Q92890 307 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 CCDC140Q96MF4 163 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 GINS4Q9BRT9 223 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 KLK9Q9UKQ9 250 aa12.93□□□□□ -0.34
HMGN1-210ENST00000464078 RBM7Q9Y580 266 aaKnown RBP12.93□□□□□ -0.34
HMGN1-210ENST00000464078 LOC102724200A0A096LPH7 203 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-210ENST00000464078 CXorf65A6NEN9 183 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 TEX22C9J3V5 150 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 MFNGO00587 321 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 NDUFB8O95169 186 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 ATF4P18848 351 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-210ENST00000464078 PSMA1P25786 263 aaKnown RBP12.92□□□□□ -0.34
HMGN1-210ENST00000464078 TNFRSF9Q07011 255 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 MED22Q15528 200 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 TRAM1Q15629 374 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 ANKRD55Q3KP44 614 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 C2orf76Q3KRA6 126 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 ZNF57Q68EA5 555 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-210ENST00000464078 OR52B4Q8NGK2 314 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 TMEM203Q969S6 136 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 MLXQ9UH92 298 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 RAB22AQ9UL26 194 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 TP53TG1Q9Y2A0 90 aa12.92□□□□□ -0.34
HMGN1-210ENST00000464078 KMT2AQ03164 3969 aa12.91□□□□□ -0.34
HMGN1-210ENST00000464078 TMEM272A0A1B0GTI8 110 aa12.91□□□□□ -0.34
HMGN1-210ENST00000464078 ARL3P36405 182 aa12.91□□□□□ -0.34
HMGN1-210ENST00000464078 IRF3Q14653 427 aa12.91□□□□□ -0.34
HMGN1-210ENST00000464078 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
HMGN1-210ENST00000464078 HIST1H1DP16402 221 aaKnown RBP12.9□□□□□ -0.34
HMGN1-210ENST00000464078 GADD45AP24522 165 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 PSMD7P51665 324 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 PLA2G7Q13093 441 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 PMS2P11Q13670 270 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 SSX1Q16384 188 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 FAM106AQ4KMX7 169 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 Q6ZWC4 215 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 KCTD9Q7L273 389 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 ZNF645Q8N7E2 425 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 OR10R2Q8NGX6 335 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 MAFIPQ8WZ33 124 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 FANCD2OSQ96PS1 177 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 SLC2A9Q9NRM0 540 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 MRPS7Q9Y2R9 242 aaKnown RBP12.9□□□□□ -0.34
HMGN1-210ENST00000464078 V9GY05 133 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 HERC2O95714 4834 aa12.9□□□□□ -0.34
HMGN1-210ENST00000464078 TRAV25A0A0B4J276 109 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 A0A0J9YWU9 116 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 HMX3A6NHT5 357 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 RAB27BO00194 218 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 FCGR3BO75015 233 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 KBTBD11O94819 623 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 CRYGCP07315 174 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 IL6RP08887 468 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-210ENST00000464078 ZNF735P0CB33 412 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 GNB3P16520 340 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 CALRP27797 417 aaKnown RBP12.89□□□□□ -0.35
HMGN1-210ENST00000464078 MAS1LP35410 378 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 RPS25P62851 125 aaKnown RBP12.89□□□□□ -0.35
HMGN1-210ENST00000464078 ARFRP1Q13795 201 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 OR4A47Q6IF82 309 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 CEMP1Q6PRD7 247 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-210ENST00000464078 UXS1Q8NBZ7 420 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 VSTM2AQ8TAG5 236 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 TMEM167AQ8TBQ9 72 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 MARC2Q969Z3 335 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 OR51E2Q9H255 320 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 PRELID3BQ9Y3B1 194 aa12.89□□□□□ -0.35
HMGN1-210ENST00000464078 HECTD4Q9Y4D8 3996 aa12.88□□□□□ -0.35
HMGN1-210ENST00000464078 IGKV1D-8A0A087WSZ0 117 aa12.88□□□□□ -0.35
HMGN1-210ENST00000464078 A0A1B0GW64 132 aa12.88□□□□□ -0.35
HMGN1-210ENST00000464078 PTGES3LE9PB15 166 aa12.88□□□□□ -0.35
HMGN1-210ENST00000464078 DHFRP00374 187 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms