RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 SSX5O60225 188 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 SPDEFO95238 335 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 SCTP09683 121 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 CEACAM6P40199 344 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 OR4A4PQ8NGN8 299 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 SPATA25Q9BR10 227 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 SLIRPQ9GZT3 109 aaKnown RBP15.14■□□□□ 0.01
VARS-221ENST00000463184 PARP12Q9H0J9 701 aaKnown RBP15.14■□□□□ 0.01
VARS-221ENST00000463184 ZNF355PQ9NSJ1 428 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 CSMD3Q7Z407 3707 aa15.14■□□□□ 0.01
VARS-221ENST00000463184 A0A0G2JLM5 398 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 H0Y980 276 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 CTDSP2O14595 271 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 RGS5O15539 181 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 FABP7O15540 132 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 ZBTB25P24278 435 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 RPS16P62249 146 aaKnown RBP15.13■□□□□ 0.01
VARS-221ENST00000463184 FXYD3Q14802 87 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 MAFIPQ8WZ33 124 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 ST6GALNAC5Q9BVH7 336 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 NXF2Q9GZY0 626 aaKnown RBP15.13■□□□□ 0.01
VARS-221ENST00000463184 C11orf54Q9H0W9 315 aaPredicted RBP15.13■□□□□ 0.01
VARS-221ENST00000463184 ADAM30Q9UKF2 790 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 DNAH1Q9P2D7 4330 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 STARD9Q9P2P6 4700 aa15.13■□□□□ 0.01
VARS-221ENST00000463184 DIRAS3O95661 229 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 HLA-DQB1P01920 261 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 GSTT2P0CG29 244 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 GSTT2BP0CG30 244 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 CBX5P45973 191 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 KLF5Q13887 457 aaPredicted RBP15.12■□□□□ 0.01
VARS-221ENST00000463184 POC5Q8NA72 575 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 DRAXINQ8NBI3 349 aaPredicted RBP15.12■□□□□ 0.01
VARS-221ENST00000463184 DCUN1D5Q9BTE7 237 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 MIXL1Q9H2W2 232 aa15.12■□□□□ 0.01
VARS-221ENST00000463184 MRPS7Q9Y2R9 242 aaKnown RBP15.12■□□□□ 0.01
VARS-221ENST00000463184 EPPK1P58107 5090 aaKnown RBP15.11■□□□□ 0.01
VARS-221ENST00000463184 PROP1O75360 226 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 TPPPO94811 219 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 IGKV1-16P04430 117 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 IFNA6P05013 189 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 PTHLHP12272 177 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 PRSS3P35030 304 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 HAGHQ16775 308 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 PDPNQ86YL7 162 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 OR9G4Q8NGQ1 327 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 MCFD2Q8NI22 146 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 GRPEL2Q8TAA5 225 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 TMEM68Q96MH6 324 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 CABLES2Q9BTV7 478 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 C6orf62Q9GZU0 229 aaPredicted RBP15.11■□□□□ 0.01
VARS-221ENST00000463184 OR1A1Q9P1Q5 309 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 EXTL2Q9UBQ6 330 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 ZNF221Q9UK13 617 aa15.11■□□□□ 0.01
VARS-221ENST00000463184 IGKV1D-8A0A087WSZ0 117 aa15.1■□□□□ 0.01
VARS-221ENST00000463184 IGKV1-6A0A0C4DH72 117 aa15.1■□□□□ 0.01
VARS-221ENST00000463184 ADAMTSL5Q6ZMM2 481 aa15.1■□□□□ 0.01
VARS-221ENST00000463184 HOGA1Q86XE5 327 aa15.1■□□□□ 0.01
VARS-221ENST00000463184 LAX1Q8IWV1 398 aa15.1■□□□□ 0.01
VARS-221ENST00000463184 ZNF383Q8NA42 475 aa15.1■□□□□ 0.01
VARS-221ENST00000463184 OR5T1Q8NG75 326 aa15.1■□□□□ 0.01
VARS-221ENST00000463184 ANKRD34BA5PLL1 514 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 SLC25A17O43808 307 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 CNIH1O95406 144 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 BRI3O95415 125 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 APOA2P02652 100 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 CTXN2P0C2S0 81 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 IGSF11Q5DX21 431 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 IL34Q6ZMJ4 242 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 C15orf40Q8WUR7 153 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 TUBA4BQ9H853 241 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 BIRC6Q9NR09 4857 aa15.09■□□□□ 0.01
VARS-221ENST00000463184 TRBV6-7A0A0A0MS04 114 aa15.08■□□□□ 0
VARS-221ENST00000463184 BET1O15155 118 aa15.08■□□□□ 0
VARS-221ENST00000463184 AADACP22760 399 aa15.08■□□□□ 0
VARS-221ENST00000463184 LINC00205P59089 165 aa15.08■□□□□ 0
VARS-221ENST00000463184 TATDN3Q17R31 274 aa15.08■□□□□ 0
VARS-221ENST00000463184 CNIH2Q6PI25 160 aa15.08■□□□□ 0
VARS-221ENST00000463184 GTSCR1Q86UQ5 136 aa15.08■□□□□ 0
VARS-221ENST00000463184 SNX29P2Q8IUI4 249 aa15.08■□□□□ 0
VARS-221ENST00000463184 GVQW1Q8N7I0 195 aa15.08■□□□□ 0
VARS-221ENST00000463184 BEST4Q8NFU0 473 aa15.08■□□□□ 0
VARS-221ENST00000463184 OR10J5Q8NHC4 309 aa15.08■□□□□ 0
VARS-221ENST00000463184 DIRAS2Q96HU8 199 aa15.08■□□□□ 0
VARS-221ENST00000463184 SCPEP1Q9HB40 452 aa15.08■□□□□ 0
VARS-221ENST00000463184 SIGLEC8Q9NYZ4 499 aa15.08■□□□□ 0
VARS-221ENST00000463184 ANXA10Q9UJ72 324 aa15.08■□□□□ 0
VARS-221ENST00000463184 TNCP24821 2201 aa15.07■□□□□ 0
VARS-221ENST00000463184 SULT1C2O00338 296 aa15.07■□□□□ 0
VARS-221ENST00000463184 LGALS7P47929 136 aa15.07■□□□□ 0
VARS-221ENST00000463184 SYNJ2BPP57105 145 aa15.07■□□□□ 0
VARS-221ENST00000463184 LCN12Q6JVE5 192 aa15.07■□□□□ 0
VARS-221ENST00000463184 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.07■□□□□ 0
VARS-221ENST00000463184 GPX8Q8TED1 209 aa15.07■□□□□ 0
VARS-221ENST00000463184 THAP7Q9BT49 309 aaPredicted RBP15.07■□□□□ 0
VARS-221ENST00000463184 IFT46Q9NQC8 304 aa15.07■□□□□ 0
VARS-221ENST00000463184 RDH8Q9NYR8 311 aa15.07■□□□□ 0
VARS-221ENST00000463184 RABL2AQ9UBK7 228 aaPredicted RBP15.07■□□□□ 0
VARS-221ENST00000463184 PEF1Q9UBV8 284 aaKnown RBP15.07■□□□□ 0
VARS-221ENST00000463184 RABL2BQ9UNT1 228 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms