RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 IGHV4OR15-8A0A075B7B6 117 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 A0A087WW49 117 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 LINC01619G3V211 115 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 TMEM127O75204 238 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 LGALS1P09382 135 aaKnown RBP13.92□□□□□ -0.18
LINC00960-201ENST00000463183 SAA1P0DJI8 122 aaPredicted RBP13.92□□□□□ -0.18
LINC00960-201ENST00000463183 CBX5P45973 191 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 TMBIM6P55061 237 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 DGCR2P98153 550 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 RUNX1Q01196 453 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 EGFEM1PQ0D2K5 195 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 PRSS8Q16651 343 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 TMEM17Q86X19 198 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 DCUN1D4Q92564 292 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 BCL7BQ9BQE9 202 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 SLC5A7Q9GZV3 580 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 COA4Q9NYJ1 87 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 CEPT1Q9Y6K0 416 aa13.92□□□□□ -0.18
LINC00960-201ENST00000463183 MSGN1A6NI15 193 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 ACTL6BO94805 426 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 PPYP01298 95 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 EIF4EP06730 217 aaKnown RBP13.91□□□□□ -0.18
LINC00960-201ENST00000463183 ECI1P42126 302 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 CLVS1Q8IUQ0 354 aaPredicted RBP13.91□□□□□ -0.18
LINC00960-201ENST00000463183 MFSD4AQ8N468 514 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 TEX45Q8NA69 505 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 HSD17B10Q99714 261 aaKnown RBP13.91□□□□□ -0.18
LINC00960-201ENST00000463183 RBM38Q9H0Z9 239 aaKnown RBP13.91□□□□□ -0.18
LINC00960-201ENST00000463183 SLA2Q9H6Q3 261 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 EHFQ9NZC4 300 aa13.91□□□□□ -0.18
LINC00960-201ENST00000463183 C13orf42A0A1B0GVH6 325 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 PMP2P02689 132 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 HERV-K104P61576 105 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 CDK10Q15131 360 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 MRGPRG-AS1Q2M3A8 158 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 C10orf55Q5SWW7 151 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 SSX9Q7RTT3 188 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 OR5AP2Q8NGF4 316 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 OR4S2Q8NH73 311 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 RAB2BQ8WUD1 216 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 SRSF12Q8WXF0 261 aaKnown RBP13.9□□□□□ -0.18
LINC00960-201ENST00000463183 DLX4Q92988 240 aaPredicted RBP13.9□□□□□ -0.18
LINC00960-201ENST00000463183 PRR25Q96S07 402 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 ZNF430Q9H8G1 570 aaPredicted RBP13.9□□□□□ -0.18
LINC00960-201ENST00000463183 TNCP24821 2201 aa13.9□□□□□ -0.18
LINC00960-201ENST00000463183 ANKRD34BA5PLL1 514 aa13.9□□□□□ -0.19
LINC00960-201ENST00000463183 OVOL1O14753 267 aa13.9□□□□□ -0.19
LINC00960-201ENST00000463183 LY86O95711 162 aa13.9□□□□□ -0.19
LINC00960-201ENST00000463183 PRSS3P35030 304 aa13.9□□□□□ -0.19
LINC00960-201ENST00000463183 SNX29P2Q8IUI4 249 aa13.9□□□□□ -0.19
LINC00960-201ENST00000463183 KCTD12Q96CX2 325 aaKnown RBP13.9□□□□□ -0.19
LINC00960-201ENST00000463183 HPGDSO60760 199 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 SAP30O75446 220 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 PRH1P02810 166 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 RFX2P48378 723 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 RNASE12Q5GAN4 147 aaKnown RBP13.89□□□□□ -0.19
LINC00960-201ENST00000463183 ZNF66Q6ZN08 573 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 OVCH2Q7RTZ1 564 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 OR5H2Q8NGV7 314 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 OR51H1Q8NH63 302 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 RHOVQ96L33 236 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 NDUFA13Q9P0J0 144 aa13.89□□□□□ -0.19
LINC00960-201ENST00000463183 ZMAT5Q9UDW3 170 aaKnown RBP13.89□□□□□ -0.19
LINC00960-201ENST00000463183 SMIM31A0A1B0GVY4 71 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 DPPA5A6NC42 116 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 FAM25AB3EWG3 89 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 FAM25CB3EWG5 89 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 FAM25GB3EWG6 89 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 ZNF701M0R085 212 aaPredicted RBP13.88□□□□□ -0.19
LINC00960-201ENST00000463183 SULT1C2O00338 296 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 CREBL2O60519 120 aaPredicted RBP13.88□□□□□ -0.19
LINC00960-201ENST00000463183 HSPB1P04792 205 aaKnown RBP13.88□□□□□ -0.19
LINC00960-201ENST00000463183 HLA-DMAP28067 261 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 RORCP51449 518 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 EIF4EBP1Q13541 118 aaPredicted RBP13.88□□□□□ -0.19
LINC00960-201ENST00000463183 ZNF818PQ6ZRF7 136 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 MMD2Q8IY49 270 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 SPAG16Q8N0X2 631 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 ISOC1Q96CN7 298 aa13.88□□□□□ -0.19
LINC00960-201ENST00000463183 ZNF2Q9BSG1 426 aaPredicted RBP13.88□□□□□ -0.19
LINC00960-201ENST00000463183 H3BUA1 57 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 RAMP3O60896 148 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 OR2A4O95047 310 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 OR9G9P0C7N8 305 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 BRWD1-AS2P59051 145 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 CATR1Q13166 79 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 AADACL3Q5VUY0 350 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 TMEM68Q96MH6 324 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 FYTTD1Q96QD9 318 aaKnown RBP13.87□□□□□ -0.19
LINC00960-201ENST00000463183 OR2A7Q96R45 310 aa13.87□□□□□ -0.19
LINC00960-201ENST00000463183 A0A0G2JLM5 398 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 A6NHS1 94 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 HMX3A6NHT5 357 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 H3BMQ9 156 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 KBTBD11O94819 623 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 APOA1P02647 267 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 RPA2P15927 270 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 ELK1P19419 428 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 KIR2DS2P43631 304 aa13.86□□□□□ -0.19
LINC00960-201ENST00000463183 GIMAP1Q8WWP7 306 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms