RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PYDC2Q56P42 97 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 SPIN3Q5JUX0 258 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 ATAD3CQ5T2N8 411 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 PXDC1Q5TGL8 231 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 TEX36Q5VZQ5 186 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 STUMQ69YW2 141 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4L9Q6RFH8 374 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-205ENST00000462254 LYPD2Q6UXB3 125 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 BAIAP2L2Q6UXY1 529 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DNM1P46Q6ZS02 220 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 LINC00596Q86U02 117 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CD177Q8N6Q3 437 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 C15orf54Q8N8G6 183 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF383Q8NA42 475 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CHST4Q8NCG5 386 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 OR4A4PQ8NGN8 299 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 OR1B1Q8NGR6 318 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 OR11L1Q8NGX0 322 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 PLPPR1Q8TBJ4 325 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 SMIM4Q8WVI0 70 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 NUDCD2Q8WVJ2 157 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 FCAMRQ8WWV6 532 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CCL17Q92583 94 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 RDH5Q92781 318 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 RAB3CQ96E17 227 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 CCL19Q99731 98 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 HDHD3Q9BSH5 251 aaPredicted RBP3.75□□□□□ -1.81
CSMD3-205ENST00000462254 FAAP24Q9BTP7 215 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 PPA2Q9H2U2 334 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 TMEM106BQ9NUM4 274 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 DUX4Q9UBX2 424 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 KLK11Q9UBX7 282 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF222Q9UK12 451 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 NUP50Q9UKX7 468 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 FLVCR2Q9UPI3 526 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 RBMX2Q9Y388 322 aaKnown RBP3.75□□□□□ -1.81
CSMD3-205ENST00000462254 SELENOKQ9Y6D0 94 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 HELZ2Q9BYK8 2649 aaKnown RBP3.75□□□□□ -1.81
CSMD3-205ENST00000462254 WNK2Q9Y3S1 2297 aa3.75□□□□□ -1.81
CSMD3-205ENST00000462254 GCN1Q92616 2671 aaKnown RBP3.75□□□□□ -1.81
CSMD3-205ENST00000462254 IGLV5-37A0A075B6J1 123 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 IGLV5-45A0A087WSX0 123 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 IGLV5-39A0A0G2JS06 123 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 GABARAPH6UMI1 98 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 TNFRSF13BO14836 293 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-205ENST00000462254 PPIHO43447 177 aaKnown RBP3.74□□□□□ -1.81
CSMD3-205ENST00000462254 GSTZ1O43708 216 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF737O75373 536 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 UPK1BO75841 260 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 GYPAP02724 150 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 DAOP14920 347 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 MUC1P15941 1255 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-205ENST00000462254 RPL35AP18077 110 aaKnown RBP3.74□□□□□ -1.81
CSMD3-205ENST00000462254 FUT3P21217 361 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 PITPNAQ00169 270 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 PTPN13Q12923 2485 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 FAM189A2Q15884 450 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 PSG3Q16557 428 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 AVPI1Q5T686 147 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 HACD4Q5VWC8 232 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 MALRD1Q5VYJ5 2156 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 FAHD2BQ6P2I3 314 aaPredicted RBP3.74□□□□□ -1.81
CSMD3-205ENST00000462254 Q8N402 240 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 BPIFB2Q8N4F0 458 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF525Q8N782 197 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 FAM216BQ8N7L0 139 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 GDPD1Q8N9F7 314 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 ZNF565Q8N9K5 539 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 SUMF2Q8NBJ7 301 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 ZNRF1Q8ND25 227 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 DEFB108BQ8NET1 73 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 OR4S1Q8NGB4 309 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 OR4D10Q8NGI6 311 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 OR6F1Q8NGZ6 308 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 NEK7Q8TDX7 302 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 MAFIPQ8WZ33 124 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 BORCS5Q969J3 196 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 FAHD2AQ96GK7 314 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 GAFA1Q96PS6 74 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 CCL13Q99616 98 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 TMEM246Q9BRR3 403 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 CCDC32Q9BV29 185 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 CHST6Q9GZX3 395 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 Q9HAA7 133 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 ABCB10Q9NRK6 738 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 PLEKHJ1Q9NW61 149 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 RASL12Q9NYN1 266 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 CTSZQ9UBR2 303 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 MTFP1Q9UDX5 166 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 AK3Q9UIJ7 227 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 ANAPC10Q9UM13 185 aa3.74□□□□□ -1.81
CSMD3-205ENST00000462254 IGKV1D-8A0A087WSZ0 117 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TRAV39A0A0B4J263 110 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 TRAV38-1A0A0B4J264 116 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 ANKRD20A5PA0PJZ0 165 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 MEX3AA1L020 520 aaKnown RBP3.73□□□□□ -1.81
CSMD3-205ENST00000462254 MCRIP1C9JLW8 97 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 SULT1C2O00338 296 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 DEGS1O15121 323 aa3.73□□□□□ -1.81
CSMD3-205ENST00000462254 PLA2G10O15496 165 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms