RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 TMEM241Q24JQ0 296 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
COL4A6-204ENST00000461897 SLC35E4Q6ICL7 350 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 ACSM6Q6P461 480 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 C5orf30Q96GV9 206 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 WFIKKN1Q96NZ8 548 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
COL4A6-204ENST00000461897 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
COL4A6-204ENST00000461897 NBASA2RRP1 2371 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 RAB29O14966 203 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 HAND1O96004 215 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 ADORA2A-AS1P86434 159 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 TMEM249Q2WGJ8 235 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 SPRNQ5BIV9 151 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 GFI1BQ5VTD9 330 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 NCR3LG1Q68D85 454 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 FIP1L1Q6UN15 594 aaKnown RBP10.33□□□□□ -0.76
COL4A6-204ENST00000461897 SSX8Q7RTT4 187 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 ZNF383Q8NA42 475 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 OR10A7Q8NGE5 316 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 PRR7Q8TB68 274 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 CIB3Q96Q77 187 aaPredicted RBP10.33□□□□□ -0.76
COL4A6-204ENST00000461897 SSX3Q99909 188 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 SMIM7Q9BQ49 75 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 KCNIP1Q9NZI2 227 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 COL6A6A6NMZ7 2263 aa10.33□□□□□ -0.76
COL4A6-204ENST00000461897 CLDN1O95832 211 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 ZNF16P17020 682 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-204ENST00000461897 CHRNB4P30926 498 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 CEBPDP49716 269 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-204ENST00000461897 ELLP55199 621 aaPredicted RBP10.32□□□□□ -0.76
COL4A6-204ENST00000461897 CATR1Q13166 79 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 OR51G1Q8NGK1 321 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 RNASEH2CQ8TDP1 164 aaKnown RBP10.32□□□□□ -0.76
COL4A6-204ENST00000461897 GALMQ96C23 342 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 OR2V2Q96R30 315 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 DIRC2Q96SL1 478 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 LAMP3Q9UQV4 416 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 TPRP12270 2363 aaKnown RBP10.32□□□□□ -0.76
COL4A6-204ENST00000461897 TRBV23-1A0A0A0MS06 115 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 ODAMA1E959 279 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 OOEPA6NGQ2 149 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 FAM90A27PA6NNH2 459 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 C12orf77C9JDV5 145 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 SOX15O60248 233 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 CLDN14O95500 239 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 PAX1P15863 534 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 PSMB3P49720 205 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 BRWD1-AS2P59051 145 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 RPL23P62829 140 aaKnown RBP10.32□□□□□ -0.76
COL4A6-204ENST00000461897 RPL30P62888 115 aaKnown RBP10.32□□□□□ -0.76
COL4A6-204ENST00000461897 PAX5Q02548 391 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 MZT1Q08AG7 82 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 CDSNQ15517 529 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 BSXQ3C1V8 233 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 FBXL19-AS1Q494R0 122 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 AARDQ4LEZ3 155 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 CDPF1Q6NVV7 123 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 ACP7Q6ZNF0 438 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 PRR18Q8N4B5 295 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 OR4X1Q8NH49 305 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 OR5R1Q8NH85 324 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 OR1L1Q8NH94 360 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 PFDN5Q99471 154 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 GFOD1Q9NXC2 390 aa10.32□□□□□ -0.76
COL4A6-204ENST00000461897 SPRY3O43610 288 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 PSPNO60542 156 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 RAMP3O60896 148 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 VENTXO95231 258 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 LY86O95711 162 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 GRNP28799 593 aaKnown RBP10.31□□□□□ -0.76
COL4A6-204ENST00000461897 GNB2P62879 340 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 ZNF66Q6ZN08 573 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 C16orf82Q7Z2V1 217 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 TMEM183AQ8IXX5 376 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 FAM216AQ8WUB2 273 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 ANAPC16Q96DE5 110 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 MEGF10Q96KG7 1140 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 HIST1H2BLQ99880 126 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 ACTR3CQ9C0K3 210 aaPredicted RBP10.31□□□□□ -0.76
COL4A6-204ENST00000461897 OR2D2Q9H210 308 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 ICE1Q9Y2F5 2266 aa10.31□□□□□ -0.76
COL4A6-204ENST00000461897 SMCO3A2RU48 225 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 TFF1P04155 84 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 EGR1P18146 543 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 OR3A1P47881 315 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 ADIPOQQ15848 244 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 OR8G2PQ6IF36 304 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 OR10P1Q8NGE3 313 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 OR10G9Q8NGN4 311 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 OR10G7Q8NGN6 311 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 LRRC29Q8WV35 223 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 NPCDR1Q9BY65 106 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 DVL1O14640 695 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 S1PR2O95136 353 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 IFNA10P01566 189 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 IGHV1-46P01743 117 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 HBZP02008 142 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 TYMSP04818 313 aa10.3□□□□□ -0.76
COL4A6-204ENST00000461897 FGF7P21781 194 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms