RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 PLSCR3Q9NRY6 295 aa11.46□□□□□ -0.57
GTF3C5-208ENST00000461871 HSPB7Q9UBY9 170 aa11.46□□□□□ -0.57
GTF3C5-208ENST00000461871 CACNG5Q9UF02 275 aa11.46□□□□□ -0.57
GTF3C5-208ENST00000461871 ITGB1BP2Q9UKP3 347 aa11.46□□□□□ -0.57
GTF3C5-208ENST00000461871 WASHC3Q9Y3C0 194 aa11.46□□□□□ -0.57
GTF3C5-208ENST00000461871 TBL2Q9Y4P3 447 aaKnown RBP11.46□□□□□ -0.57
GTF3C5-208ENST00000461871 INSIG2Q9Y5U4 225 aa11.46□□□□□ -0.57
GTF3C5-208ENST00000461871 B4DSR2 109 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 SYNGR2O43760 224 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 CD1BP29016 333 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 G6PCP35575 357 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 ATP5IP56385 69 aaPredicted RBP11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 S100A10P60903 97 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 RPL23AP62750 156 aaKnown RBP11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 EIF5AP63241 154 aaKnown RBP11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 Q6ZRM9 215 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 ZNF767PQ75MW2 155 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 SLC51BQ86UW2 128 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 PNKDQ8N490 385 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 DMBX1Q8NFW5 382 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 GRPEL2Q8TAA5 225 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 PERPQ96FX8 193 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 ARL6Q9H0F7 186 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 BET1LQ9NYM9 111 aa11.45□□□□□ -0.58
GTF3C5-208ENST00000461871 TRAV20A0A0B4J274 112 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 IGHV4-61A0A0C4DH41 118 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 A0A0G2JRQ6 117 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 KANTRA0A1W2PQU2 76 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 RNF222A6NCQ9 220 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 TOX4O94842 621 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 CRYZL1O95825 349 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 RPL12P30050 165 aaKnown RBP11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 SPCS3P61009 180 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 VAMP2P63027 116 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 LCN2P80188 198 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 TNFRSF9Q07011 255 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 BAXQ07812 192 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 LOXL1Q08397 574 aaPredicted RBP11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 HABP2Q14520 560 aaPredicted RBP11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 CXorf66Q5JRM2 361 aaPredicted RBP11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 RPEQ96AT9 228 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 MALSU1Q96EH3 234 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 MRPL20Q9BYC9 149 aaKnown RBP11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 OR5AC2Q9NZP5 309 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 PRNDQ9UKY0 176 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 ZNF257Q9Y2Q1 563 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 LSM5Q9Y4Y9 91 aaKnown RBP11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 AKAP6Q13023 2319 aa11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 USP9YO00507 2555 aaPredicted RBP11.44□□□□□ -0.58
GTF3C5-208ENST00000461871 UTP20O75691 2785 aaKnown RBP11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 IGHV4-30-2A0A087WSY4 118 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 IGHV1-3A0A0C4DH29 117 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 CHST1O43916 411 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 TSC22D2O75157 780 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 HKR1P10072 659 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 COL8A1P27658 744 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 AP2S1P53680 142 aaPredicted RBP11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 LGALS4P56470 323 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 HCP5Q6MZN7 132 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 VMO1Q7Z5L0 202 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 OR2C3Q8N628 320 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 OR4A16Q8NH70 328 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 ARPC5LQ9BPX5 153 aa11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 LYRM2Q9NU23 88 aaPredicted RBP11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 FOXA2Q9Y261 457 aaPredicted RBP11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 RCL1Q9Y2P8 373 aaKnown RBP11.43□□□□□ -0.58
GTF3C5-208ENST00000461871 SHOXO15266 292 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 BCL2L11O43521 198 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 SCGB1D2O95969 90 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 IFNA7P01567 189 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 ARG1P05089 322 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 LINC00205P59089 165 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 BPIFB3P59826 476 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 UBE2KP61086 200 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 POLR2GP62487 172 aaKnown RBP eCLIP11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 RPP30P78346 268 aaKnown RBP11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 RELBQ01201 579 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 OR2B11Q5JQS5 317 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 TPTE2P1Q5T6R2 138 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 PUSL1Q8N0Z8 303 aaKnown RBP11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 TEX45Q8NA69 505 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 PHYHIPLQ96FC7 376 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 TSNAXQ99598 290 aaKnown RBP11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 MMP26Q9NRE1 261 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 TMEM14BQ9NUH8 114 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 TMEM140Q9NV12 185 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 ZFHX3Q15911 3703 aa11.42□□□□□ -0.58
GTF3C5-208ENST00000461871 FAM157AC9JC47 383 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 H7C2Y5 167 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 J3QLI3 93 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 UPK2O00526 184 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 JTBO76095 146 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 MSMBP08118 114 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 MAS1LP35410 378 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 HSPE1P61604 102 aaKnown RBP11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 RPS16P62249 146 aaKnown RBP11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 UBA52P62987 128 aaKnown RBP11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 VMA21Q3ZAQ7 101 aa11.41□□□□□ -0.58
GTF3C5-208ENST00000461871 OR4A47Q6IF82 309 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms