RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CEBPGP53567 150 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 TAS2R20P59543 309 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 CAV1Q03135 178 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 AESQ08117 197 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 HIST3H3Q16695 136 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 PABPC1L2AQ5JQF8 200 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 CD200R1LQ6Q8B3 271 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 C5orf46Q6UWT4 87 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 COMMD7Q86VX2 200 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 C1orf174Q8IYL3 243 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 CLDND2Q8NHS1 167 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 SMCR5Q8TEV8 140 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 CCL13Q99616 98 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 C16orf95Q9H693 158 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF337Q9Y3M9 751 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 SAMHD1Q9Y3Z3 626 aaKnown RBP1.35□□□□□ -2.19
HDAC6-212ENST00000461608 PLB1Q6P1J6 1458 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 TRPM3Q9HCF6 1732 aaPredicted RBP1.35□□□□□ -2.19
HDAC6-212ENST00000461608 DHX57Q6P158 1386 aaKnown RBP1.34□□□□□ -2.19
HDAC6-212ENST00000461608 DOCK6Q96HP0 2047 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 A0A087WUU8 490 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 TGIF2-C20orf24A0A0A6YYL0 155 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 IGHV1-69-2A0A0G2JMI3 117 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 A0A1W2PQD3 144 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 C21orf140B9A014 251 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 C3orf84H3BNL1 204 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 KCNK1O00180 336 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 PGRMC1O00264 195 aaKnown RBP1.34□□□□□ -2.19
HDAC6-212ENST00000461608 S1PR2O95136 353 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 TCRBP04435 133 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 CALB1P05937 261 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 FABP1P07148 127 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 FAM228BP0C875 321 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 ALDH3A1P30838 453 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 SERPINB10P48595 397 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 LSM6P62312 80 aaKnown RBP1.34□□□□□ -2.19
HDAC6-212ENST00000461608 EMX1Q04741 257 aaPredicted RBP1.34□□□□□ -2.19
HDAC6-212ENST00000461608 FABP9Q0Z7S8 132 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 SNCBQ16143 134 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 IMPG1Q17R60 797 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 C1orf195Q5TG92 126 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 DAND5Q8N907 189 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 OR13C8Q8NGS7 320 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 RPS4Y2Q8TD47 263 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 PTH2Q96A98 100 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 ROPN1LQ96C74 230 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 GNPNAT1Q96EK6 184 aaPredicted RBP1.34□□□□□ -2.19
HDAC6-212ENST00000461608 PECRQ9BY49 303 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 FAM96AQ9H5X1 160 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 XAGE1AQ9HD64 81 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 HRASLSQ9HDD0 168 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 RSL24D1Q9UHA3 163 aaKnown RBP1.34□□□□□ -2.19
HDAC6-212ENST00000461608 GUCA1BQ9UMX6 200 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 KMT2EQ8IZD2 1858 aa1.34□□□□□ -2.19
HDAC6-212ENST00000461608 TTC21AQ8NDW8 1320 aa1.34□□□□□ -2.2
HDAC6-212ENST00000461608 DICER1Q9UPY3 1922 aaKnown RBP1.33□□□□□ -2.2
HDAC6-212ENST00000461608 MYO9BQ13459 2157 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 SHANK3Q9BYB0 1731 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TMED7-TICAM2A0A0A6YYA0 188 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TRGV5A0A0B4J1U4 118 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TNNC2P02585 160 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 ZNF728P0DKX0 622 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 ZNF140P52738 457 aaPredicted RBP1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TCL1AP56279 114 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 RAB5BP61020 215 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 AP1S1P61966 158 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 ZNF90Q03938 601 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 RELAQ04206 551 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TAF1AQ15573 450 aaPredicted RBP1.33□□□□□ -2.2
HDAC6-212ENST00000461608 LGALS9BQ3B8N2 356 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 ACSM3Q53FZ2 586 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 C1orf194Q5T5A4 169 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 HACD4Q5VWC8 232 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 LGALS9CQ6DKI2 356 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 SPOPLQ6IQ16 392 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 AGTRAPQ6RW13 159 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 ZNF550Q7Z398 422 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 AKAP14Q86UN6 197 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 LHFPL1Q86WI0 220 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 KRTAP13-1Q8IUC0 172 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TRAPPC5Q8IUR0 188 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 GID4Q8IVV7 300 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 SLC22A24Q8N4F4 322 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 ZNF283Q8N7M2 679 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 GPR32P1Q8NGA4 272 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 OR5B17Q8NGF7 314 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 OR5J2Q8NH18 312 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 OR4X1Q8NH49 305 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 EEF1AKMT1Q8WVE0 214 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 SFRP2Q96HF1 295 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 CXCL16Q9H2A7 254 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 GPR84Q9NQS5 396 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TMEM106BQ9NUM4 274 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 TAAR3PQ9P1P4 343 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 DCAF1Q9Y4B6 1507 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 ADAMTSL1Q8N6G6 1762 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 KIF15Q9NS87 1388 aa1.33□□□□□ -2.2
HDAC6-212ENST00000461608 THSD7AQ9UPZ6 1657 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms