RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 CEACAM1P13688 526 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 TSPAN7P41732 249 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 C20orf204Q6ZNR8 217 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 KLHDC1Q8N7A1 406 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 LYPD6BQ8NI32 183 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 TMEM45BQ96B21 275 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 STARD4Q96DR4 205 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 FOXI3A8MTJ6 420 aaPredicted RBP12.2□□□□□ -0.46
NCL-207ENST00000461347 TAS2R60P59551 318 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 UBE2L3P68036 154 aaKnown RBP12.2□□□□□ -0.46
NCL-207ENST00000461347 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
NCL-207ENST00000461347 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 Q6ZN92 141 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 FOXL2NBQ6ZUU3 175 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 TFF1P04155 84 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 RNASEKQ6P5S7 137 aaKnown RBP12.2□□□□□ -0.46
NCL-207ENST00000461347 TRAT1Q6PIZ9 186 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 TGIF2LYQ8IUE0 185 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 C14orf144Q96I85 54 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 QTRT1Q9BXR0 403 aaKnown RBP12.2□□□□□ -0.46
NCL-207ENST00000461347 ZNF703Q9H7S9 590 aaPredicted RBP12.2□□□□□ -0.46
NCL-207ENST00000461347 ARHGAP21Q5T5U3 1957 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 TRAV1-1A0A0B4J248 108 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 LILRA1O75019 489 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 PRDX2P32119 198 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 NUBP1P53384 320 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 ASCL4Q6XD76 172 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 SFRP2Q96HF1 295 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 DCTN5Q9BTE1 182 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 OR6C3Q9NZP0 311 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 TIMM9Q9Y5J7 89 aa12.2□□□□□ -0.46
NCL-207ENST00000461347 TMEM210A6NLX4 147 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 HPRT1P00492 218 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 RPLP1P05386 114 aaKnown RBP12.19□□□□□ -0.46
NCL-207ENST00000461347 C1QTNF9P0C862 333 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 SPCS3P61009 180 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 GCSAMLQ5JQS6 135 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 SSX7Q7RTT5 188 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 MOGAT3Q86VF5 341 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 LEAP2Q969E1 77 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 MRPL18Q9H0U6 180 aaKnown RBP12.19□□□□□ -0.46
NCL-207ENST00000461347 ARL2-SNX15V9GYD0 113 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 SLC17A3O00476 420 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 TOX4O94842 621 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 TCF23Q7RTU1 214 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 OR10X1Q8NGY0 326 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 KLF14Q8TD94 323 aaPredicted RBP12.19□□□□□ -0.46
NCL-207ENST00000461347 MISP3Q96FF7 219 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 NDUFAF3Q9BU61 184 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 OPN3Q9H1Y3 402 aaPredicted RBP12.19□□□□□ -0.46
NCL-207ENST00000461347 RNF24Q9Y225 148 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 DIRC3C9JPN6 131 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 VENTXO95231 258 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 CELA3BP08861 270 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 NTF4P34130 210 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 GABRA6Q16445 453 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 DMRTA1Q5VZB9 504 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 DTX1Q86Y01 620 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 SLC24A4Q8NFF2 622 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 DYNLRB1Q9NP97 96 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 TMEM167BQ9NRX6 74 aa12.19□□□□□ -0.46
NCL-207ENST00000461347 MPDU1O75352 247 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 NEURL1O76050 574 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 IGLV3-1P01715 115 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 IL3RAP26951 378 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 FXYD3Q14802 87 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 SSC4DQ8WTU2 575 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 TECRQ9NZ01 308 aaKnown RBP12.18□□□□□ -0.46
NCL-207ENST00000461347 MKI67P46013 3256 aaKnown RBP12.18□□□□□ -0.46
NCL-207ENST00000461347 NKX6-3A6NJ46 265 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 OPRK1P41145 380 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 RAB7AP51149 207 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 SUB1P53999 127 aaKnown RBP eCLIP12.18□□□□□ -0.464e-10■■■■■ 57
NCL-207ENST00000461347 RPL31P62899 125 aaKnown RBP12.18□□□□□ -0.46
NCL-207ENST00000461347 WDR73Q6P4I2 378 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 TMEM170AQ8WVE7 144 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 PAX9P55771 341 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 VAMP3Q15836 100 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 MAJINQ3KP22 176 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 HES3Q5TGS1 186 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 STUMQ69YW2 141 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 ZNF835Q9Y2P0 537 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 EML5Q05BV3 1969 aa12.18□□□□□ -0.46
NCL-207ENST00000461347 NRN1LQ496H8 165 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 INO80CQ6PI98 192 aaPredicted RBP12.17□□□□□ -0.46
NCL-207ENST00000461347 DMRTC2Q8IXT2 367 aaPredicted RBP12.17□□□□□ -0.46
NCL-207ENST00000461347 WIPI2Q9Y4P8 454 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 C1orf210Q8IVY1 113 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 BLNKQ8WV28 456 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 GTF3AQ92664 365 aaKnown RBP12.17□□□□□ -0.46
NCL-207ENST00000461347 SCO2A0A1W2PP80 73 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 M0QZK8 103 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 CHEK1O14757 476 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 GGCTO75223 188 aaKnown RBP12.17□□□□□ -0.46
NCL-207ENST00000461347 USF1P22415 310 aaPredicted RBP12.17□□□□□ -0.46
NCL-207ENST00000461347 LCN2P80188 198 aa12.17□□□□□ -0.46
NCL-207ENST00000461347 RND1Q92730 232 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms