RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 CSN1S1P47710 185 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 TFF3Q07654 80 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 IL15RAQ13261 267 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 C5orf24Q7Z6I8 188 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
CPNE6-202ENST00000460657 RND1Q92730 232 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 TRBV23-1A0A0A0MS06 115 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 RPL31P62899 125 aaKnown RBP10.16□□□□□ -0.78
CPNE6-202ENST00000460657 WDR31Q8NA23 367 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 LIME1Q9H400 295 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 M0R143 59 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 PAX5Q02548 391 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 PCSK4Q6UW60 755 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 TMEM183AQ8IXX5 376 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 VKORC1L1Q8N0U8 176 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 OR5AU1Q8NGC0 362 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 RFNGQ9Y644 331 aa10.16□□□□□ -0.78
CPNE6-202ENST00000460657 ORM2P19652 201 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 TNFSF10P50591 281 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 C1orf185Q5T7R7 199 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 TGIF2LYQ8IUE0 185 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 TGIF2LXQ8IUE1 241 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 LINC00587B1AMM8 73 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 FTH1P19P0C7X4 201 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 DDTP30046 118 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 VWA1Q6PCB0 445 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 COLCA1Q6ZS62 124 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 PDPNQ86YL7 162 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 C1QL4Q86Z23 238 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 FDCSPQ8NFU4 85 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 FAM216AQ8WUB2 273 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 BLNKQ8WV28 456 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 TRGV8A0A0C4DH27 118 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 PQLC2Q6ZP29 291 aa10.15□□□□□ -0.78
CPNE6-202ENST00000460657 SLC25A10Q9UBX3 287 aaPredicted RBP10.15□□□□□ -0.78
CPNE6-202ENST00000460657 H0Y8G0 127 aa10.15□□□□□ -0.79
CPNE6-202ENST00000460657 EGR1P18146 543 aa10.15□□□□□ -0.79
CPNE6-202ENST00000460657 PRRX1P54821 245 aa10.15□□□□□ -0.79
CPNE6-202ENST00000460657 OR4X1Q8NH49 305 aa10.15□□□□□ -0.79
CPNE6-202ENST00000460657 RPEQ96AT9 228 aa10.15□□□□□ -0.79
CPNE6-202ENST00000460657 FOXI3A8MTJ6 420 aaPredicted RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 NDUFA2O43678 99 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 SS18L1O75177 396 aaPredicted RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 C10orf113Q5VZT2 155 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 MRPL54Q6P161 138 aaKnown RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 TMEM105Q8N8V8 129 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 USF1P22415 310 aaPredicted RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 CCL8P80075 99 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HERPUD1Q15011 391 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 ZNF146Q15072 292 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 RPL39P5Q59GN2 51 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 ZNRF1Q8ND25 227 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 LEAP2Q969E1 77 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 SFXN3Q9BWM7 321 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 SEBOXQ9HB31 216 aaPredicted RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 ZNF355PQ9NSJ1 428 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 IDI2-AS1Q9NZ38 188 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HSPB7Q9UBY9 170 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 CEP250Q9BV73 2442 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 MUC22E2RYF6 1773 aaPredicted RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 C16orf97H3BN30 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BKO60814 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 RAMP3O60896 148 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BJP06899 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BOP23527 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BBP33778 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BDP58876 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 SSTP61278 116 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BCP62807 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 RPL23P62829 140 aaKnown RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 PAFAH1B2P68402 229 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 LCN2P80188 198 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST2H2BEQ16778 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BHQ93079 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BNQ99877 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 HIST1H2BMQ99879 126 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 VSIRQ9H7M9 311 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 APC2O95996 2303 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 TNXAQ16473 311 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 STXBP6Q8NFX7 210 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 DCTN5Q9BTE1 182 aa10.14□□□□□ -0.79
CPNE6-202ENST00000460657 DENND4AQ7Z401 1863 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 IGKV1-5P01602 117 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 RBP4P02753 201 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 CAMPP49913 170 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 HNRNPA3P51991 378 aaKnown RBP10.13□□□□□ -0.79
CPNE6-202ENST00000460657 RTP5Q14D33 572 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 RNASEKQ6P5S7 137 aaKnown RBP10.13□□□□□ -0.79
CPNE6-202ENST00000460657 OR1B1Q8NGR6 318 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 SPTA1P02549 2419 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 GPR179Q6PRD1 2367 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 PPIAL4EA0A075B759 164 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 PPIAL4DF5H284 164 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 IL18BPO95998 194 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 MT-ND6P03923 174 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 CD55P08174 381 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 PPIAL4FP0DN26 164 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 SFRP2Q96HF1 295 aa10.13□□□□□ -0.79
CPNE6-202ENST00000460657 TMEM242Q9NWH2 141 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms