RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 OR2B11Q5JQS5 317 aa17.78■□□□□ 0.44
C9orf3-209ENST00000460573 PRR31Q5SQ13 230 aa17.78■□□□□ 0.44
C9orf3-209ENST00000460573 TEX45Q8NA69 505 aa17.78■□□□□ 0.44
C9orf3-209ENST00000460573 MARCH1Q8TCQ1 289 aa17.78■□□□□ 0.44
C9orf3-209ENST00000460573 HRASP01112 189 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 F2RP25116 425 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 UBE2KP61086 200 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 TBC1D26Q86UD7 250 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 FOXRED2Q8IWF2 684 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 CCDC71LQ8N9Z2 235 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 OR13C8Q8NGS7 320 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 MRGPRFQ96AM1 343 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 C7orf50Q9BRJ6 194 aaKnown RBP17.77■□□□□ 0.44
C9orf3-209ENST00000460573 WNT10AQ9GZT5 417 aa17.77■□□□□ 0.44
C9orf3-209ENST00000460573 C14orf166Q9Y224 244 aaKnown RBP17.77■□□□□ 0.44
C9orf3-209ENST00000460573 SRRM4A7MD48 611 aaKnown RBP17.76■□□□□ 0.43
C9orf3-209ENST00000460573 CENPXA8MT69 81 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 MPPED1O15442 326 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 SLC25A17O43808 307 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 PIGPP57054 158 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 PPP1R27Q86WC6 154 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 VSTM2AQ8TAG5 236 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 PLEKHA2Q9HB19 425 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 COPZ2Q9P299 210 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 GPR132Q9UNW8 380 aa17.76■□□□□ 0.43
C9orf3-209ENST00000460573 AP4M1O00189 453 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 RAMP3O60896 148 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 CRYGBP07316 175 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 TAS2R31P59538 309 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 TREML4Q6UXN2 200 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 CHPT1Q8WUD6 406 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 WFDC12Q8WWY7 111 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 COMMD9Q9P000 198 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 ZNF580Q9UK33 172 aa17.75■□□□□ 0.43
C9orf3-209ENST00000460573 IGHV7-81A0A0B4J1V7 117 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 CREBL2O60519 120 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-209ENST00000460573 B3GALNT1O75752 331 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 VSIG10L2P0DP72 767 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 ZNF562Q6V9R5 426 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 KLHDC1Q8N7A1 406 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 HSPB9Q9BQS6 159 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 SLC25A21Q9BQT8 299 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-209ENST00000460573 GON7Q9BXV9 100 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 OR51J1Q9H342 316 aa17.74■□□□□ 0.43
C9orf3-209ENST00000460573 IGF1P05019 195 aa17.73■□□□□ 0.43
C9orf3-209ENST00000460573 NQO2P16083 231 aa17.73■□□□□ 0.43
C9orf3-209ENST00000460573 PI3P19957 117 aa17.73■□□□□ 0.43
C9orf3-209ENST00000460573 TMEM95Q3KNT9 176 aa17.73■□□□□ 0.43
C9orf3-209ENST00000460573 RHOVQ96L33 236 aa17.73■□□□□ 0.43
C9orf3-209ENST00000460573 RTBDNQ9BSG5 229 aaPredicted RBP17.73■□□□□ 0.43
C9orf3-209ENST00000460573 FCN1O00602 326 aa17.72■□□□□ 0.43
C9orf3-209ENST00000460573 SAA1P0DJI8 122 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-209ENST00000460573 LPAR6P43657 344 aa17.72■□□□□ 0.43
C9orf3-209ENST00000460573 CX3CL1P78423 397 aa17.72■□□□□ 0.43
C9orf3-209ENST00000460573 POU2AF1Q16633 256 aa17.72■□□□□ 0.43
C9orf3-209ENST00000460573 CENPVQ7Z7K6 275 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-209ENST00000460573 STPG2Q8N412 459 aa17.72■□□□□ 0.43
C9orf3-209ENST00000460573 CLCC1Q96S66 551 aa17.72■□□□□ 0.43
C9orf3-209ENST00000460573 C5orf66Q9H5L9 145 aa17.72■□□□□ 0.43
C9orf3-209ENST00000460573 LINC01548A6NM66 108 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 H0Y980 276 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 UPK1BO75841 260 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 OR2A4O95047 310 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 RPA2P15927 270 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 ZNF585BQ52M93 769 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 PUSL1Q8N0Z8 303 aaKnown RBP17.71■□□□□ 0.43
C9orf3-209ENST00000460573 CADM3Q8N126 398 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 OR4A5Q8NH83 315 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 WIPF2Q8TF74 440 aaPredicted RBP17.71■□□□□ 0.43
C9orf3-209ENST00000460573 OR2A7Q96R45 310 aa17.71■□□□□ 0.43
C9orf3-209ENST00000460573 C3orf85A0A1B0GTC6 90 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 M0QZ24 198 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 S1PR2O95136 353 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 CA2P00918 260 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 ERVK-16P61578 105 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 SLC35B1P78383 322 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 RBMS2Q15434 407 aaKnown RBP17.7■□□□□ 0.42
C9orf3-209ENST00000460573 PRSS8Q16651 343 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 MMD2Q8IY49 270 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 TPSG1Q9NRR2 321 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 BET1LQ9NYM9 111 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 VSIG4Q9Y279 399 aa17.7■□□□□ 0.42
C9orf3-209ENST00000460573 TEX13DA0A0J9YY54 714 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-209ENST00000460573 KBTBD11O94819 623 aa17.69■□□□□ 0.42
C9orf3-209ENST00000460573 SERPINE2P07093 398 aa17.69■□□□□ 0.42
C9orf3-209ENST00000460573 CRIP2P52943 208 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-209ENST00000460573 SRSF4Q08170 494 aaKnown RBP17.69■□□□□ 0.42
C9orf3-209ENST00000460573 VKORC1L1Q8N0U8 176 aa17.69■□□□□ 0.42
C9orf3-209ENST00000460573 TMEM167AQ8TBQ9 72 aa17.69■□□□□ 0.42
C9orf3-209ENST00000460573 R3HDM4Q96D70 268 aa17.69■□□□□ 0.42
C9orf3-209ENST00000460573 NOL4LQ96MY1 436 aaPredicted RBP17.69■□□□□ 0.42
C9orf3-209ENST00000460573 CITED1Q99966 193 aa17.69■□□□□ 0.42
C9orf3-209ENST00000460573 PARP11Q9NR21 331 aa17.69■□□□□ 0.42
C9orf3-209ENST00000460573 LINC00854A0A1B0GVQ3 168 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 PSMB11A5LHX3 300 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 CRYM-AS1A6NIL9 109 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 ATP6V0E1O15342 81 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 CNIH1O95406 144 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 FGF2P09038 288 aa17.68■□□□□ 0.42
C9orf3-209ENST00000460573 VDAC1P21796 283 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms