RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 DNAJC30Q96LL9 226 aa2.82□□□□□ -1.96
CCDC50-203ENST00000460064 DUSP21Q9H596 190 aa2.82□□□□□ -1.96
CCDC50-203ENST00000460064 C14orf105Q9NVL8 296 aa2.82□□□□□ -1.96
CCDC50-203ENST00000460064 MRPL27Q9P0M9 148 aaKnown RBP2.82□□□□□ -1.96
CCDC50-203ENST00000460064 PIK3C2GO75747 1445 aa2.82□□□□□ -1.96
CCDC50-203ENST00000460064 DCAF1Q9Y4B6 1507 aa2.82□□□□□ -1.96
CCDC50-203ENST00000460064 BICRAQ9NZM4 1560 aa2.82□□□□□ -1.96
CCDC50-203ENST00000460064 TRAV8-2A0A0B4J237 113 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 FAM236DA0A1B0GTK5 79 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 MAP1LC3B2A6NCE7 125 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 C4orf51C9J302 202 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 K7EQS6 105 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 SULT1C4O75897 302 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 ARL6IP5O75915 188 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 PDYNP01213 254 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 C1QBP02746 253 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 C1QCP02747 245 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 ATP5G1P05496 136 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 BPGMP07738 259 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 FBP1P09467 338 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 FAM236CP0DP71 79 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 S100A2P29034 98 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 AGTR1P30556 359 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 CA5AP35218 305 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 RCVRNP35243 200 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 GLRXP35754 106 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 MAP2K4P45985 399 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 CKS1BP61024 79 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 HPCAP84074 193 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 BAMBIQ13145 260 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 WHAMMP3Q1A5X7 153 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 FAM162BQ5T6X4 162 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 SAMD13Q5VXD3 122 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 LPCAT3Q6P1A2 487 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 DCUN1D2Q6PH85 259 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 TOMM20LQ6UXN7 152 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 TCF24Q7RTU0 167 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 ZNF550Q7Z398 422 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 OR52L1Q8NGH7 329 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 OR51A2Q8NGJ7 313 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 GNB1LQ9BYB4 327 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 MAP1LC3BQ9GZQ8 125 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 PYCARDQ9ULZ3 195 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 PTPRGP23470 1445 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 WRNQ14191 1432 aaPredicted RBP eCLIP2.81□□□□□ -1.96
CCDC50-203ENST00000460064 MYO15BQ96JP2 1530 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 KIF1BO60333 1816 aa2.81□□□□□ -1.96
CCDC50-203ENST00000460064 SEC16AO15027 2179 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 ARAP1Q96P48 1450 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 UHRF1BP1Q6BDS2 1440 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 A0A087WX48 190 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 IGHV3-21A0A0B4J1V1 117 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 IGHV2-26A0A0B4J1V2 119 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 IGHV3-43A0A0B4J1X8 118 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 FAM183AA6NL82 134 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 F5H5P2 479 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 SLC17A3O00476 420 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 IGKV4-1P06312 121 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 COX4I1P13073 169 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 PSMD8P48556 350 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 MARCKSL1P49006 195 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 H2BFSP57053 126 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 GTF2BQ00403 316 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 DEFA6Q01524 100 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 PRDX4Q13162 271 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 C1DQ13901 141 aaKnown RBP2.8□□□□□ -1.96
CCDC50-203ENST00000460064 PLPPR5Q32ZL2 321 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 DEFB134Q4QY38 66 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 MESTQ5EB52 335 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 N4BP2L1Q5TBK1 243 aaPredicted RBP2.8□□□□□ -1.96
CCDC50-203ENST00000460064 DOLPP1Q86YN1 238 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 UMODL1-AS1Q8N2C9 162 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 ZNF439Q8NDP4 499 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 ZNRF2Q8NHG8 242 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 APOBEC3DQ96AK3 386 aaPredicted RBP2.8□□□□□ -1.96
CCDC50-203ENST00000460064 BORCS7Q96B45 105 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 TVP23CQ96ET8 276 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 PRSS27Q9BQR3 290 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 GABARAPL1Q9H0R8 117 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 CISHQ9NSE2 258 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 PRNDQ9UKY0 176 aa2.8□□□□□ -1.96
CCDC50-203ENST00000460064 KDM5BQ9UGL1 1544 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 ZNF518AQ6AHZ1 1483 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 PTPRKQ15262 1439 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 PTPRJQ12913 1337 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 M0QYV0 167 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 HMGB3O15347 200 aaKnown RBP2.79□□□□□ -1.96
CCDC50-203ENST00000460064 CA2P00918 260 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 IGKV1D-33P01593 117 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 IGKV1-33P01594 117 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 IGLV6-57P01721 117 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 CNTFRP26992 372 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 SDC4P31431 198 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 TBPL1P62380 186 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 IAH1Q2TAA2 248 aaPredicted RBP2.79□□□□□ -1.96
CCDC50-203ENST00000460064 FAM201AQ5SY85 155 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 TMPPEQ6ZT21 453 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 MARCH3Q86UD3 253 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 OR9Q1Q8NGQ5 310 aa2.79□□□□□ -1.96
CCDC50-203ENST00000460064 DNAJC9Q8WXX5 260 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms