RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 TRAM1Q15629 374 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 GPHB5Q86YW7 130 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 H1FOOQ8IZA3 346 aaPredicted RBP9.27□□□□□ -0.93
GPNMB-204ENST00000459927 OR10R2Q8NGX6 335 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 ACOT12Q8WYK0 555 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 MAFIPQ8WZ33 124 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 SPIN2AQ99865 258 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 SPIN2BQ9BPZ2 258 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 CENPOQ9BU64 300 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 SRD5A3Q9H8P0 318 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 ZC4H2Q9NQZ6 224 aa9.27□□□□□ -0.93
GPNMB-204ENST00000459927 PPP5D1E7EU14 171 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 RAB27BO00194 218 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 CASQ2O14958 399 aaPredicted RBP9.26□□□□□ -0.93
GPNMB-204ENST00000459927 GGCTO75223 188 aaKnown RBP9.26□□□□□ -0.93
GPNMB-204ENST00000459927 OR2J3O76001 311 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 ACTL6BO94805 426 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 HLA-AP01891 365 aaKnown RBP9.26□□□□□ -0.93
GPNMB-204ENST00000459927 HSMCR30P0CW71 290 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 CALRP27797 417 aaKnown RBP9.26□□□□□ -0.93
GPNMB-204ENST00000459927 FABP5Q01469 135 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 CDK10Q15131 360 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 RCN1Q15293 331 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 C15orf32Q32M92 178 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 FAM209BQ5JX69 171 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 HES5Q5TA89 166 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 Q6ZS49 121 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 MMD2Q8IY49 270 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
GPNMB-204ENST00000459927 GINS4Q9BRT9 223 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 DCUN1D5Q9BTE7 237 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 WFDC10AQ9H1F0 79 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 OR51E2Q9H255 320 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 DUSP21Q9H596 190 aa9.26□□□□□ -0.93
GPNMB-204ENST00000459927 IGKV1D-8A0A087WSZ0 117 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 HMX3A6NHT5 357 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 E7EUB6 86 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 J3QRK9 145 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 IL6RP08887 468 aaPredicted RBP9.25□□□□□ -0.93
GPNMB-204ENST00000459927 PSMA1P25786 263 aaKnown RBP9.25□□□□□ -0.93
GPNMB-204ENST00000459927 SLC25A42Q86VD7 318 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 DYNLRB2Q8TF09 96 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 OVOL2Q9BRP0 275 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 FBXL7Q9UJT9 491 aa9.25□□□□□ -0.93
GPNMB-204ENST00000459927 A0A075B6Q4 140 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 MFNGO00587 321 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 FCGR3BO75015 233 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 NDUFB8O95169 186 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 HLA-DQB1P01920 261 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 SAA1P0DJI8 122 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-204ENST00000459927 GADD45AP24522 165 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 TALDO1P37837 337 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 RPL30P62888 115 aaKnown RBP9.24□□□□□ -0.93
GPNMB-204ENST00000459927 MLLT11Q13015 90 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-204ENST00000459927 C10orf55Q5SWW7 151 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 FANCD2OSQ96PS1 177 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 MGLLQ99685 303 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 ACOT13Q9NPJ3 140 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 SLC2A9Q9NRM0 540 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 ELF5Q9UKW6 265 aaPredicted RBP9.24□□□□□ -0.93
GPNMB-204ENST00000459927 ZNF257Q9Y2Q1 563 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 TPRKBQ9Y3C4 175 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 SELENOKQ9Y6D0 94 aa9.24□□□□□ -0.93
GPNMB-204ENST00000459927 METTL21EPA6NDL7 271 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 ERICH4A6NGS2 130 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 CREBL2O60519 120 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-204ENST00000459927 IGLV2-14P01704 120 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 CRYGCP07315 174 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 HIST1H1DP16402 221 aaKnown RBP9.23□□□□□ -0.93
GPNMB-204ENST00000459927 RAB6AP20340 208 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 BRWD1-AS2P59051 145 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 ARFRP1Q13795 201 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 KLK9Q2XQG4 91 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 FAM106AQ4KMX7 169 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 ZNF57Q68EA5 555 aaPredicted RBP9.23□□□□□ -0.93
GPNMB-204ENST00000459927 CLEC19AQ6UXS0 136 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 SLC16A13Q7RTY0 426 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 VKORC1L1Q8N0U8 176 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 ZNF645Q8N7E2 425 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 UXS1Q8NBZ7 420 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 OR2A7Q96R45 310 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 ST6GALNAC5Q9BVH7 336 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 KLK9Q9UKQ9 250 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 PRELID3BQ9Y3B1 194 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 OR2W1Q9Y3N9 320 aa9.23□□□□□ -0.93
GPNMB-204ENST00000459927 LOC102724200A0A096LPH7 203 aaPredicted RBP9.22□□□□□ -0.93
GPNMB-204ENST00000459927 TRAV1-2A0A0B4J238 106 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 A0A1B0GW64 132 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 ZNF320A2RRD8 509 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 IFITM5A6NNB3 132 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 NPIPB5A8MRT5 1133 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 PDCD5O14737 125 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 RGS10O43665 173 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 SLC22A5O76082 557 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 IGHV3-23P01764 117 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 CLEC3BP05452 202 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 CTXN2P0C2S0 81 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 ARL3P36405 182 aa9.22□□□□□ -0.93
GPNMB-204ENST00000459927 CDNFQ49AH0 187 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms