RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 POU2AF1Q16633 256 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 OR2B11Q5JQS5 317 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 VWA1Q6PCB0 445 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 FAM180AQ6UWF9 173 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 SLC16A13Q7RTY0 426 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 VASH2Q86V25 355 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 CISD2Q8N5K1 135 aaKnown RBP7.36□□□□□ -1.23
HDAC3-202ENST00000459727 CD177Q8N6Q3 437 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 OR4F5Q8NH21 305 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 STARD4Q96DR4 205 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 MEGF10Q96KG7 1140 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 OR4F4Q96R69 305 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 VSIRQ9H7M9 311 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 MSL2Q9HCI7 577 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 HEYLQ9NQ87 328 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-202ENST00000459727 UFSP2Q9NUQ7 469 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 FKBP11Q9NYL4 201 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 CALYQ9NYX4 217 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 MIOXQ9UGB7 285 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 PRNDQ9UKY0 176 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 FOXA2Q9Y261 457 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-202ENST00000459727 ZNF257Q9Y2Q1 563 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 R4GN57 208 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 URGCP-MRPS24S4R325 110 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 SDK1Q7Z5N4 2213 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 IGLV3-9A0A075B6K5 115 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 IGKV1D-17A0A075B6S4 117 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 C15orf61A6NNL5 157 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 C11orf94C9JXX5 98 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 ST8SIA5O15466 376 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 NKX2-8O15522 239 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 GATCO43716 136 aaKnown RBP7.35□□□□□ -1.23
HDAC3-202ENST00000459727 FCGR3BO75015 233 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 AGFG2O95081 481 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 LHBP01229 141 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 TRGC2P03986 189 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 IRF2P14316 349 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 RPL23P62829 140 aaKnown RBP7.35□□□□□ -1.23
HDAC3-202ENST00000459727 EDDM3AQ14507 147 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 RTL8BQ17RB0 113 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 KRTCAP3Q53RY4 240 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 COA6Q5JTJ3 125 aaKnown RBP7.35□□□□□ -1.23
HDAC3-202ENST00000459727 C1orf185Q5T7R7 199 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 ZNF343Q6P1L6 599 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 BTNL3Q6UXE8 466 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 UBALD1Q8TB05 177 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 Q8TCH9 128 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 FAM222BQ8WU58 562 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 SDSLQ96GA7 329 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 C5orf30Q96GV9 206 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 C19orf24Q9BVV8 132 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 LINC00574Q9H8X3 128 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 NPVFQ9HCQ7 196 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 GSN-AS1Q9NRJ2 163 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 GFOD1Q9NXC2 390 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 DKK4Q9UBT3 224 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 IL19Q9UHD0 177 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 DUSP13Q9UII6 198 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 LY96Q9Y6Y9 160 aa7.35□□□□□ -1.23
HDAC3-202ENST00000459727 SMG1Q96Q15 3661 aaKnown RBP7.35□□□□□ -1.23
HDAC3-202ENST00000459727 FASNP49327 2511 aaKnown RBP7.35□□□□□ -1.23
HDAC3-202ENST00000459727 MAP1BP46821 2468 aaKnown RBP7.35□□□□□ -1.23
HDAC3-202ENST00000459727 KBTBD11-OT1A0A1B0GTJ5 212 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 NKX6-3A6NJ46 265 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 LINC00473A8K010 186 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 VSTM5A8MXK1 200 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 HMGB3O15347 200 aaKnown RBP7.34□□□□□ -1.23
HDAC3-202ENST00000459727 GGCTO75223 188 aaKnown RBP7.34□□□□□ -1.23
HDAC3-202ENST00000459727 IGKV1D-33P01593 117 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 IGKV1-33P01594 117 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 GYPAP02724 150 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 PFN1P07737 140 aaKnown RBP7.34□□□□□ -1.23
HDAC3-202ENST00000459727 TRGC1P0CF51 173 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 NPY1RP25929 384 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 VDAC2P45880 294 aaPredicted RBP7.34□□□□□ -1.23
HDAC3-202ENST00000459727 BRWD1-AS2P59051 145 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 RHOBP62745 196 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 TFF3Q07654 80 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 NCMAPQ5T1S8 102 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 SSX7Q7RTT5 188 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 C16orf82Q7Z2V1 217 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 LURAP1LQ8IV03 231 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 TMEM183AQ8IXX5 376 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 HIST3H2BBQ8N257 126 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 NUP37Q8NFH4 326 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 OR51G1Q8NGK1 321 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 OR2T10Q8NGZ9 312 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 OR5R1Q8NH85 324 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 ZDHHC16Q969W1 377 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 RPUSD4Q96CM3 377 aaKnown RBP7.34□□□□□ -1.23
HDAC3-202ENST00000459727 SLC35E1Q96K37 410 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 UHRF2Q96PU4 802 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 OR2V2Q96R30 315 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 QTRT1Q9BXR0 403 aaKnown RBP7.34□□□□□ -1.23
HDAC3-202ENST00000459727 IFI27L2Q9H2X8 130 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 TMEM140Q9NV12 185 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 RNF7Q9UBF6 113 aa7.34□□□□□ -1.23
HDAC3-202ENST00000459727 M0R1B8 84 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 PAGE4O60829 102 aa7.33□□□□□ -1.24
HDAC3-202ENST00000459727 IGHV2-70P01814 119 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms