RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 FOXA2Q9Y261 457 aaPredicted RBP16.19■□□□□ 0.18
VARS-218ENST00000459667 ARPC1BO15143 372 aaKnown RBP16.18■□□□□ 0.18
VARS-218ENST00000459667 SOX15O60248 233 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 CNIH1O95406 144 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 UBE2KP61086 200 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 IL18Q14116 193 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 BEAN1Q3B7T3 259 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 RNASE12Q5GAN4 147 aaKnown RBP16.18■□□□□ 0.18
VARS-218ENST00000459667 PYHIN1Q6K0P9 492 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 DHRS11Q6UWP2 260 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 TMEM17Q86X19 198 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 MRPL41Q8IXM3 137 aaKnown RBP16.18■□□□□ 0.18
VARS-218ENST00000459667 MFSD4AQ8N468 514 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 LFNGQ8NES3 379 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 OR6F1Q8NGZ6 308 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 OR52I2Q8NH67 350 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 C4orf3Q8WVX3 66 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 RAX2Q96IS3 184 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 DUX3Q96PT4 197 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 ABHD1Q96SE0 405 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 ZNF2Q9BSG1 426 aaPredicted RBP16.18■□□□□ 0.18
VARS-218ENST00000459667 NDUFA13Q9P0J0 144 aa16.18■□□□□ 0.18
VARS-218ENST00000459667 NOTCH3Q9UM47 2321 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 TNFSF12O43508 249 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 IGLL1P15814 213 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 RAB9AP51151 201 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 SSBP2P81877 361 aaPredicted RBP16.17■□□□□ 0.18
VARS-218ENST00000459667 DEFB136Q30KP8 78 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 AKIRIN2Q53H80 203 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 LYSMD2Q8IV50 215 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 TEX45Q8NA69 505 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 OR4S2Q8NH73 311 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 GPHA2Q96T91 129 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 NXF2Q9GZY0 626 aaKnown RBP16.17■□□□□ 0.18
VARS-218ENST00000459667 MTFP1Q9UDX5 166 aa16.17■□□□□ 0.18
VARS-218ENST00000459667 GABARAPH6UMI1 98 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 WIPF1O43516 503 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 SAA1P0DJI8 122 aaPredicted RBP16.16■□□□□ 0.18
VARS-218ENST00000459667 TBPP20226 339 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 SSBP1Q04837 148 aaKnown RBP16.16■□□□□ 0.18
VARS-218ENST00000459667 CATR1Q13166 79 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 KPRPQ5T749 579 aaPredicted RBP16.16■□□□□ 0.18
VARS-218ENST00000459667 IDO2Q6ZQW0 420 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 ZNF491Q8N8L2 437 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 OR5M8Q8NGP6 311 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 MOB3AQ96BX8 217 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 RCC1LQ96I51 464 aaKnown RBP16.16■□□□□ 0.18
VARS-218ENST00000459667 UBE2E2Q96LR5 201 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 P2RX4Q99571 388 aa16.16■□□□□ 0.18
VARS-218ENST00000459667 CCL24O00175 119 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 IFNA6P05013 189 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 S100A5P33763 92 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 KIR2DS2P43631 304 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 KIAA0141Q14154 515 aaPredicted RBP16.15■□□□□ 0.18
VARS-218ENST00000459667 MRGPRG-AS1Q2M3A8 158 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 RNASE10Q5GAN6 216 aaKnown RBP16.15■□□□□ 0.18
VARS-218ENST00000459667 ZNF818PQ6ZRF7 136 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 CASTOR1Q8WTX7 329 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 GNB4Q9HAV0 340 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 KLK11Q9UBX7 282 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 VSIG4Q9Y279 399 aa16.15■□□□□ 0.18
VARS-218ENST00000459667 FABP12A6NFH5 140 aa16.14■□□□□ 0.17
VARS-218ENST00000459667 BRWD1-AS2P59051 145 aa16.14■□□□□ 0.17
VARS-218ENST00000459667 TNXAQ16473 311 aa16.14■□□□□ 0.17
VARS-218ENST00000459667 PRSS8Q16651 343 aa16.14■□□□□ 0.17
VARS-218ENST00000459667 VAX1Q5SQQ9 334 aa16.14■□□□□ 0.17
VARS-218ENST00000459667 CTDSPLO15194 276 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 CREBL2O60519 120 aaPredicted RBP16.13■□□□□ 0.17
VARS-218ENST00000459667 DUS4LO95620 317 aaKnown RBP16.13■□□□□ 0.17
VARS-218ENST00000459667 S100GP29377 79 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 CD40LGP29965 261 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 TNFSF8P32971 234 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 RAB25P57735 213 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 TAS2R19P59542 299 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 DGCR2P98153 550 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 LPCAT3Q6P1A2 487 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 CMTM1Q8IZ96 169 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 VKORC1L1Q8N0U8 176 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 TMEM229BQ8NBD8 167 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 SMIM4Q8WVI0 70 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 DGCR14Q96DF8 476 aaKnown RBP16.13■□□□□ 0.17
VARS-218ENST00000459667 OR5B12Q96R08 314 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 FXYD6Q9H0Q3 95 aa16.13■□□□□ 0.17
VARS-218ENST00000459667 I3L521 148 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 GNRHRP30968 328 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 PDLIM3Q53GG5 364 aaPredicted RBP16.12■□□□□ 0.17
VARS-218ENST00000459667 SPAG16Q8N0X2 631 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 POC5Q8NA72 575 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 VSTM2AQ8TAG5 236 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 TMEM68Q96MH6 324 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 MS4A10Q96PG2 267 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 PHB2Q99623 299 aa16.12■□□□□ 0.17
VARS-218ENST00000459667 ZNF430Q9H8G1 570 aaPredicted RBP16.12■□□□□ 0.17
VARS-218ENST00000459667 M0QYG6 137 aa16.11■□□□□ 0.17
VARS-218ENST00000459667 RAMP3O60896 148 aa16.11■□□□□ 0.17
VARS-218ENST00000459667 ACTL6BO94805 426 aa16.11■□□□□ 0.17
VARS-218ENST00000459667 CD3DP04234 171 aa16.11■□□□□ 0.17
VARS-218ENST00000459667 TPPP2P59282 170 aa16.11■□□□□ 0.17
VARS-218ENST00000459667 RUNX1Q01196 453 aa16.11■□□□□ 0.17
VARS-218ENST00000459667 AADACL3Q5VUY0 350 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms