RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 HEXA-AS1Q9H8Q6 139 aa7.31□□□□□ -1.24
VPS50-207ENST00000458530 LSM5Q9Y4Y9 91 aaKnown RBP7.31□□□□□ -1.24
VPS50-207ENST00000458530 K7EPK0 472 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 TAAR5O14804 337 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 RGS13O14921 159 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 SLC31A2O15432 143 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 BCL2L11O43521 198 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 GPR137BO60478 399 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 MMP23AO75900 390 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
VPS50-207ENST00000458530 S1PR2O95136 353 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 MBPP02686 304 aaPredicted RBP7.3□□□□□ -1.24
VPS50-207ENST00000458530 NQO2P16083 231 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 EPHA1P21709 976 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 CEACAM3P40198 252 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 P2RY1P47900 373 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 ZNF134P52741 427 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 RPL30P62888 115 aaKnown RBP7.3□□□□□ -1.24
VPS50-207ENST00000458530 UBA52P62987 128 aaKnown RBP7.3□□□□□ -1.24
VPS50-207ENST00000458530 ZNF816Q0VGE8 651 aaPredicted RBP7.3□□□□□ -1.24
VPS50-207ENST00000458530 OPCMLQ14982 345 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 ZNF585BQ52M93 769 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 RPL39P5Q59GN2 51 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 OR2B11Q5JQS5 317 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 GPR157Q5UAW9 335 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 LAMTOR1Q6IAA8 161 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 SLC51BQ86UW2 128 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 FOXRED2Q8IWF2 684 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 ZNF525Q8N782 197 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 DMBX1Q8NFW5 382 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 R3HDM4Q96D70 268 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 C5orf30Q96GV9 206 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 Q96MF0 132 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 AQP10Q96PS8 301 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 RAB40CQ96S21 281 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 CLCC1Q96S66 551 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 ARPC5LQ9BPX5 153 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 BPESC1Q9GZL8 116 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 SLC25A31Q9H0C2 315 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 NARFLQ9H6Q4 476 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 PLSCR3Q9NRY6 295 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 CACNG5Q9UF02 275 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 KPTNQ9Y664 436 aa7.3□□□□□ -1.24
VPS50-207ENST00000458530 IGHV2-26A0A0B4J1V2 119 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 A0A1W2PPE3 182 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 MARCH11A6NNE9 402 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 LINC00473A8K010 186 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 NDUFS7O75251 213 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 RBMXL2O75526 392 aaKnown RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 KRASP01116 189 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 IGHV3-7P01780 117 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 CXCL2P19875 107 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 MC5RP33032 325 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 AP2S1P53680 142 aaPredicted RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 RPL23AP62750 156 aaKnown RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 HLA-DRB5Q30154 266 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 NCR3LG1Q68D85 454 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 FAM53AQ6NSI3 398 aaPredicted RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 PDPNQ86YL7 162 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 TGIF2LXQ8IUE1 241 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 ODF3L1Q8IXM7 274 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 OSR1Q8TAX0 266 aaPredicted RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 DDB2Q92466 427 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 GPR146Q96CH1 333 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 CIB3Q96Q77 187 aaPredicted RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 RNF126Q9BV68 326 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 SLC35D1Q9NTN3 355 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 RCL1Q9Y2P8 373 aaKnown RBP7.29□□□□□ -1.24
VPS50-207ENST00000458530 ABCA1O95477 2261 aa7.29□□□□□ -1.24
VPS50-207ENST00000458530 RNF222A6NCQ9 220 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 C22orf46C9J442 243 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 SSSCA1O60232 199 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 RAMP3O60896 148 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 PITX3O75364 302 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 CRYZL1O95825 349 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 IGKV1-39P01597 117 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 IGKV1-5P01602 117 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 IGKV1D-39P04432 117 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 SLC25A16P16260 332 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 PRTN3P24158 256 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 RPL12P30050 165 aaKnown RBP7.28□□□□□ -1.24
VPS50-207ENST00000458530 G6PCP35575 357 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 TAS2R30P59541 319 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 ID3Q02535 119 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 BAXQ07812 192 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 POU2AF1Q16633 256 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 NDUFA5Q16718 116 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 STX12Q86Y82 276 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 OR8H1Q8NGG4 311 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 OR4A16Q8NH70 328 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 CLDND2Q8NHS1 167 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 VSTM2AQ8TAG5 236 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 C10orf105Q8TEF2 133 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 RPEQ96AT9 228 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 ZNF251Q9BRH9 671 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 UNKLQ9H9P5 680 aaKnown RBP7.28□□□□□ -1.24
VPS50-207ENST00000458530 OR5AC2Q9NZP5 309 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 WASHC3Q9Y3C0 194 aa7.28□□□□□ -1.24
VPS50-207ENST00000458530 BORCS7-ASMTA0A0B4J1R7 106 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms