RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 NUDCD2Q8WVJ2 157 aa12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 TINAGL1Q9GZM7 467 aaPredicted RBP12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 MRPS7Q9Y2R9 242 aaKnown RBP12.08□□□□□ -0.48
CHCHD3-204ENST00000457942 TMEM235A6NFC5 223 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 MSGN1A6NI15 193 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 LINC00473A8K010 186 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 CREBL2O60519 120 aaPredicted RBP12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 FCGR3BO75015 233 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 SCGNO76038 276 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 SMIM18P0DKX4 95 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 NFYAP23511 347 aaPredicted RBP12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 PRSS8Q16651 343 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 OR2B11Q5JQS5 317 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 HACD4Q5VWC8 232 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 Q6ZS49 121 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 ZNF645Q8N7E2 425 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 TEX45Q8NA69 505 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 OSR1Q8TAX0 266 aaPredicted RBP12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 SRSF12Q8WXF0 261 aaKnown RBP12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 ZMAT4Q9H898 229 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 PEF1Q9UBV8 284 aaKnown RBP12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 PRELID3BQ9Y3B1 194 aa12.07□□□□□ -0.48
CHCHD3-204ENST00000457942 SYNJ2BPP57105 145 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 TATDN3Q17R31 274 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 RPEL1Q2QD12 228 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 SGPP2Q8IWX5 399 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 OR9G4Q8NGQ1 327 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 LGALS14Q8TCE9 139 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 DDB2Q92466 427 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 YIPF6Q96EC8 236 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 USMG5Q96IX5 58 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 OR2W1Q9Y3N9 320 aa12.06□□□□□ -0.48
CHCHD3-204ENST00000457942 TNCP24821 2201 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 IGLV1-51P01701 117 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 OR9G9P0C7N8 305 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 SAA1P0DJI8 122 aaPredicted RBP12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 DYRK1AQ13627 763 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 CDK10Q15131 360 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 SFXN4Q6P4A7 337 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 TPRA1Q86W33 373 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 TCTEX1D2Q8WW35 142 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 DCSTAMPQ9H295 470 aa12.05□□□□□ -0.48
CHCHD3-204ENST00000457942 AIREO43918 545 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 SLC22A5O76082 557 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 TRBV12-3P01733 135 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 ARPC4P59998 168 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 RHOGP84095 191 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 EXOSC2Q13868 293 aaKnown RBP12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 ZNF343Q6P1L6 599 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 CNIH2Q6PI25 160 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 MMD2Q8IY49 270 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 ADAD2Q8NCV1 583 aaKnown RBP12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 SPIN2AQ99865 258 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 SPIN2BQ9BPZ2 258 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 RHBDL2Q9NX52 303 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 SPATA2Q9UM82 520 aa12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 RBMX2Q9Y388 322 aaKnown RBP12.04□□□□□ -0.48
CHCHD3-204ENST00000457942 H0Y980 276 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 HLA-DQB1P01920 261 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 PRH1P02810 166 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 IGHV4-30-4P0DP06 118 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 KLF5Q13887 457 aaPredicted RBP12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 MRGPRG-AS1Q2M3A8 158 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 C10orf55Q5SWW7 151 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 IDNKQ5T6J7 187 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 OR5H6Q8NGV6 325 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 OR4S2Q8NH73 311 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 SNAPC3Q92966 411 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 ADAM30Q9UKF2 790 aa12.03□□□□□ -0.48
CHCHD3-204ENST00000457942 IGKV1D-13A0A0B4J2D9 117 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 DPPA5A6NC42 116 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 FAM223BA6NKX1 122 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 BRI3O95415 125 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 IGKV1-13P0DP09 117 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 ATP5G2Q06055 141 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 GTSCR1Q86UQ5 136 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 FAM223AQ8IWN6 122 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 VKORC1L1Q8N0U8 176 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 HSD17B10Q99714 261 aaKnown RBP12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 AKIP1Q9NQ31 210 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 TAS2R8Q9NYW2 309 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 PEMTQ9UBM1 199 aa12.02□□□□□ -0.49
CHCHD3-204ENST00000457942 TRAV18A0A075B6X5 111 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 SSX5O60225 188 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 NCS1P62166 190 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 TIMM50Q3ZCQ8 353 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 LCN12Q6JVE5 192 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 VSTM2AQ8TAG5 236 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 SECTM1Q8WVN6 248 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 ISOC1Q96CN7 298 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 FYTTD1Q96QD9 318 aaKnown RBP12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 CITED4Q96RK1 184 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 FUNDC2Q9BWH2 189 aa12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 NAA50Q9GZZ1 169 aaKnown RBP12.01□□□□□ -0.49
CHCHD3-204ENST00000457942 ETV7Q9Y603 341 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms