RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 IGHV2OR16-5A0A0B4J2B6 119 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 IQCF6A8MYZ5 107 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 TNFRSF9Q07011 255 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 USF2Q15853 346 aaPredicted RBP10.35□□□□□ -0.75
LINC00959-201ENST00000456581 SRSF7Q16629 238 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC00959-201ENST00000456581 ZNF497Q6ZNH5 498 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 BHLHA15Q7RTS1 189 aaPredicted RBP10.35□□□□□ -0.75
LINC00959-201ENST00000456581 METRNQ9UJH8 293 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 WASF3Q9UPY6 502 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 ABCA1O95477 2261 aa10.35□□□□□ -0.75
LINC00959-201ENST00000456581 ODAMA1E959 279 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 LRP5LA4QPB2 252 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 FRMD6-AS1P0C7T7 363 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 FGF7P21781 194 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 GALR1P47211 349 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 BSXQ3C1V8 233 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TMEM256Q8N2U0 113 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 ZNF114Q8NC26 417 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 FAM234AQ9H0X4 552 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 SPTBN1Q01082 2364 aaKnown RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TRAV38-1A0A0B4J264 116 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 MBD3L4A6NDZ8 208 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 MBD3L3A6NE82 208 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 MBD3L5A6NJ08 208 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 B4DEV8 164 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TIMM8AO60220 97 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 SSTR5P35346 364 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 PKIAP61925 76 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TMEM241Q24JQ0 296 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 SPRNQ5BIV9 151 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 FFAR4Q5NUL3 377 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 VHLLQ6RSH7 139 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TCF23Q7RTU1 214 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 C11orf53Q8IXP5 236 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 OR10G4Q8NGN3 311 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 OR10G9Q8NGN4 311 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 OR10G7Q8NGN6 311 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 MBD3L2Q8NHZ7 208 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 MRGPRDQ8TDS7 321 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 SCNM1Q9BWG6 230 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 DUSP13Q9UII6 198 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TP53TG5Q9Y2B4 290 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TET2Q6N021 2002 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TRBV24-1A0A075B6N3 115 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 G0S2P27469 103 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 PNRC1Q12796 327 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 TDRG1Q3Y452 100 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 LINC00596Q86U02 117 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 OR13D1Q8NGV5 346 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 LSM10Q969L4 123 aaKnown RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 RIMS4Q9H426 269 aaPredicted RBP10.34□□□□□ -0.75
LINC00959-201ENST00000456581 POLDIP2Q9Y2S7 368 aa10.34□□□□□ -0.75
LINC00959-201ENST00000456581 ELOA3CA0A087WX78 387 aaPredicted RBP10.33□□□□□ -0.76
LINC00959-201ENST00000456581 A8MWP6 167 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 C12orf77C9JDV5 145 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 OPN1MWP04001 364 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 OPN1MW2P0DN77 364 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 OPN1MW3P0DN78 364 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 FAM27E3Q08E93 113 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 VKORC1L1Q8N0U8 176 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 CISD2Q8N5K1 135 aaKnown RBP10.33□□□□□ -0.76
LINC00959-201ENST00000456581 OR1P1Q8NH06 330 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 RAB24Q969Q5 203 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 PSMG3Q9BT73 122 aaPredicted RBP10.33□□□□□ -0.76
LINC00959-201ENST00000456581 LIN7CQ9NUP9 197 aaKnown RBP10.33□□□□□ -0.76
LINC00959-201ENST00000456581 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 H7BYZ3 331 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 M0R1B8 84 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 SLC31A2O15432 143 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 KBTBD11O94819 623 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 BTF3P20290 206 aaKnown RBP10.33□□□□□ -0.76
LINC00959-201ENST00000456581 PMS2P11Q13670 270 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 ASPHD1Q5U4P2 390 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 TEX38Q6PEX7 206 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 SDSLQ96GA7 329 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 CBLN4Q9NTU7 201 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 SLC25A15Q9Y619 301 aa10.33□□□□□ -0.76
LINC00959-201ENST00000456581 TRBV6-6A0A0A6YYG2 114 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 A0A0U1RQK1 487 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 LINC00473A8K010 186 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 IGLV1-44P01699 117 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 ATP5G3P48201 142 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 SERF2P84101 59 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 JOSD1Q15040 202 aaPredicted RBP10.32□□□□□ -0.76
LINC00959-201ENST00000456581 ZNF124Q15973 351 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 PRR30Q53SZ7 412 aaPredicted RBP10.32□□□□□ -0.76
LINC00959-201ENST00000456581 CYP2G1PQ6ZSU1 146 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 TMEM183AQ8IXX5 376 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 HIPK2Q9H2X6 1198 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 J3QW42 95 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 SH2D1BO14796 132 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 PATZ1Q9HBE1 687 aaKnown RBP10.32□□□□□ -0.76
LINC00959-201ENST00000456581 PITPNC1Q9UKF7 332 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 DCHS2Q6V1P9 2916 aa10.32□□□□□ -0.76
LINC00959-201ENST00000456581 PPP5D1E7EU14 171 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 GYPAP02724 150 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 C1QTNF9P0C862 333 aa10.31□□□□□ -0.76
LINC00959-201ENST00000456581 SLC25A6P12236 298 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms