RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 RBMXL3Q8N7X1 1067 aaKnown RBP15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 R3HDM4Q96D70 268 aa15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 P2RX4Q99571 388 aa15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 PRRC2CQ9Y520 2896 aaKnown RBP15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 CLDN34H7C241 214 aa15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 CGB3P0DN86 165 aa15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 CGB7P0DN87 165 aa15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 OR10P1Q8NGE3 313 aa15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 GNG12Q9UBI6 72 aa15.24■□□□□ 0.03
SEMA3B-209ENST00000456560 MGAQ8IWI9 3026 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 APC2O95996 2303 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 K7EM74 188 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 CYB5R3P00387 301 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 OR9G9P0C7N8 305 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 MDKP21741 143 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 CEACAM8P31997 349 aaPredicted RBP15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 GNB2P62879 340 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 GAMTQ14353 236 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 ZNRF1Q8ND25 227 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 ITLN1Q8WWA0 313 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 NCOR1P1Q9H4R4 102 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 TMEM242Q9NWH2 141 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 VAX2Q9UIW0 290 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 SVILO95425 2214 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 TGOLN2O43493 480 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 SPRY3O43610 288 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 RND2P52198 227 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 ZNF134P52741 427 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 C14orf144Q96I85 54 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 QTRT1Q9BXR0 403 aaKnown RBP15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 SLC39A9Q9NUM3 307 aa15.23■□□□□ 0.03
SEMA3B-209ENST00000456560 FAM90A9PA6NNJ1 464 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 CEBPZOSA8MTT3 80 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 HPRT1P00492 218 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 CRYABP02511 175 aaKnown RBP15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 FGF7P21781 194 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 GATA4P43694 442 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 FAM222BQ8WU58 562 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 LHX4Q969G2 390 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 PLPPR2Q96GM1 343 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 SFXN3Q9BWM7 321 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 IFI27L2Q9H2X8 130 aa15.22■□□□□ 0.03
SEMA3B-209ENST00000456560 FCGR3BO75015 233 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 PLA2G5P39877 138 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 SPINK9Q5DT21 86 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 DNLZQ5SXM8 178 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 VHLLQ6RSH7 139 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 Q8TCH9 128 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 C15orf62A8K5M9 175 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 KLK10O43240 276 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 RBFOX2O43251 390 aaKnown RBP eCLIP15.21■□□□□ 0.037e-15■□□□□ 11.3
SEMA3B-209ENST00000456560 RBMXL2O75526 392 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 IFNA1P01562 189 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 RPS16P62249 146 aaKnown RBP15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 TFF3Q07654 80 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 PACRGQ96M98 296 aaPredicted RBP15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 SDF2L1Q9HCN8 221 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 CALYQ9NYX4 217 aa15.21■□□□□ 0.03
SEMA3B-209ENST00000456560 M0R1X1 148 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 MBP02144 154 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 CD81P60033 236 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 RPL39P5Q59GN2 51 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 FAM180AQ6UWF9 173 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 FAM57AQ8TBR7 257 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 GAB2Q9UQC2 676 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 CTXND1A0A1B0GTU2 59 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 ITGB1BP1O14713 200 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 EDDM3BP56851 147 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 PKIAP61925 76 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 HNF4GQ14541 408 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 C17orf58Q2M2W7 97 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 FAM201AQ5SY85 155 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 C22orf34Q6ZV56 151 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 BOD1L1Q8NFC6 3051 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 SSX3Q99909 188 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 NPCDR1Q9BY65 106 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 PRO1933Q9H354 126 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 OR6C3Q9NZP0 311 aa15.2■□□□□ 0.02
SEMA3B-209ENST00000456560 DOCK11Q5JSL3 2073 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 UTF1Q5T230 341 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 OR10G9Q8NGN4 311 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 OR10G7Q8NGN6 311 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 ACACAQ13085 2346 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 CADP27708 2225 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 TRBV24-1A0A075B6N3 115 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 SMCO3A2RU48 225 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 A8MXE2 369 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 TSTD3H0UI37 97 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 OPN1MWP04001 364 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 OPN1MW2P0DN77 364 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 OPN1MW3P0DN78 364 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 SELLP14151 372 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 DDTP30046 118 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 KRTCAP3Q53RY4 240 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 FFAR4Q5NUL3 377 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 C1orf229Q6ZS94 237 aaPredicted RBP15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 DDB2Q92466 427 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 SDSLQ96GA7 329 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 HIST1H2BLQ99880 126 aa15.19■□□□□ 0.02
SEMA3B-209ENST00000456560 RNF7Q9UBF6 113 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms