RNA–Protein interactions for RNA: ENST00000455996.6

TMEM220-202, Transcript of transmembrane protein 220, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM220, Length 1,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-202ENST00000455996 PDLIM3Q53GG5 364 aaPredicted RBP13.07□□□□□ -0.32
TMEM220-202ENST00000455996 TPTE2P1Q5T6R2 138 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 SLC51BQ86UW2 128 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 LHX4Q969G2 390 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 RHOVQ96L33 236 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 MAGT1Q9H0U3 335 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 TMEM140Q9NV12 185 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 DPM3Q9P2X0 92 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 CACFD1Q9UGQ2 172 aa13.07□□□□□ -0.32
TMEM220-202ENST00000455996 LEUTXA8MZ59 168 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 RNASEK-C17orf49H0YIS7 233 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 SYNGR2O43760 224 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 SSSCA1O60232 199 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 HOXB4P17483 251 aaPredicted RBP13.06□□□□□ -0.32
TMEM220-202ENST00000455996 HTR1DP28221 377 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 RELBQ01201 579 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 PRB3Q04118 309 aaPredicted RBP13.06□□□□□ -0.32
TMEM220-202ENST00000455996 LDLRAD2Q5SZI1 272 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 TEX261Q6UWH6 196 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 ZNF429Q86V71 674 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 OR52E5Q8NH55 327 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 ARPC5LQ9BPX5 153 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 LYRM2Q9NU23 88 aaPredicted RBP13.06□□□□□ -0.32
TMEM220-202ENST00000455996 U3KQ87 197 aa13.06□□□□□ -0.32
TMEM220-202ENST00000455996 IGHV1-3A0A0C4DH29 117 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 KANTRA0A1W2PQU2 76 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 SRRM4A7MD48 611 aaKnown RBP13.05□□□□□ -0.32
TMEM220-202ENST00000455996 WRBO00258 174 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 TSC22D2O75157 780 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 MED6O75586 246 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 TOX4O94842 621 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 ARG1P05089 322 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 USF1P22415 310 aaPredicted RBP13.05□□□□□ -0.32
TMEM220-202ENST00000455996 KLRD1Q13241 179 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 MINOS1Q5TGZ0 78 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 OR4A47Q6IF82 309 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 ZNF767PQ75MW2 155 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 VKORC1L1Q8N0U8 176 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 PUSL1Q8N0Z8 303 aaKnown RBP13.05□□□□□ -0.32
TMEM220-202ENST00000455996 OR2C3Q8N628 320 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 OR4C13Q8NGP0 309 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 RPEQ96AT9 228 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 FLYWCH2Q96CP2 140 aaKnown RBP13.05□□□□□ -0.32
TMEM220-202ENST00000455996 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 BET1LQ9NYM9 111 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 WSB1Q9Y6I7 421 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 MINOS1-NBL1R4GNA1 71 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 ARHGAP32A7KAX9 2087 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 A0A1W2PPI3 338 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 OOSP1A8MZH6 123 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 TAAR5O14804 337 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 CEACAM3P40198 252 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 UBE2KP61086 200 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 VAMP2P63027 116 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 HABP2Q14520 560 aaPredicted RBP13.05□□□□□ -0.32
TMEM220-202ENST00000455996 SSX9Q7RTT3 188 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 OR8H3Q8N146 312 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 CYTL1Q9NRR1 136 aa13.05□□□□□ -0.32
TMEM220-202ENST00000455996 DOPEY2Q9Y3R5 2298 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 C15orf61A6NNL5 157 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 H7C2Y5 167 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 LY86O95711 162 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 FGF2P09038 288 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 LGALS7P47929 136 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 UBE2E1P51965 193 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 OR4A16Q8NH70 328 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
TMEM220-202ENST00000455996 SLC25A31Q9H0C2 315 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 RBKSQ9H477 322 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 TMEM14BQ9NUH8 114 aa13.04□□□□□ -0.32
TMEM220-202ENST00000455996 FOXA2Q9Y261 457 aaPredicted RBP13.04□□□□□ -0.32
TMEM220-202ENST00000455996 TBL2Q9Y4P3 447 aaKnown RBP13.04□□□□□ -0.32
TMEM220-202ENST00000455996 TRAV3A0A0B4J244 114 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 IGSF23A1L1A6 192 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 UPK2O00526 184 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 SHOXO15266 292 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 NXPH3O95157 252 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 CFDP00746 253 aaPredicted RBP13.03□□□□□ -0.32
TMEM220-202ENST00000455996 IGLV2-23P01705 113 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 SPCS3P61009 180 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 RPL23AP62750 156 aaKnown RBP13.03□□□□□ -0.32
TMEM220-202ENST00000455996 UBA52P62987 128 aaKnown RBP13.03□□□□□ -0.32
TMEM220-202ENST00000455996 EWSR1Q01844 656 aaKnown RBP eCLIP13.03□□□□□ -0.32
TMEM220-202ENST00000455996 PRSS57Q6UWY2 283 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 TMEM252Q8N6L7 170 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 OR8H1Q8NGG4 311 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 OR4A5Q8NH83 315 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 HARBI1Q96MB7 349 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 RNF5Q99942 180 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 MS4A7Q9GZW8 240 aaPredicted RBP13.03□□□□□ -0.32
TMEM220-202ENST00000455996 PRNDQ9UKY0 176 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 TACC2O95359 2948 aa13.03□□□□□ -0.32
TMEM220-202ENST00000455996 FASNP49327 2511 aaKnown RBP13.02□□□□□ -0.33
TMEM220-202ENST00000455996 FAM24AA6NFZ4 105 aa13.02□□□□□ -0.33
TMEM220-202ENST00000455996 MSMBP08118 114 aa13.02□□□□□ -0.33
TMEM220-202ENST00000455996 SAA1P0DJI8 122 aaPredicted RBP13.02□□□□□ -0.33
TMEM220-202ENST00000455996 BAXQ07812 192 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms