RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 TCF21O43680 179 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 FCGR2BP31994 310 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 TM4SF4P48230 202 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 SLC25A35Q3KQZ1 300 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 HAPLN4Q86UW8 402 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 KIR3DL3Q8N743 410 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 JPT1Q9UK76 154 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 LRP4O75096 1905 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 PLAUP00749 431 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 CXCL10P02778 98 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 IER3P46695 156 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 CAMPP49913 170 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 SPTY2D1-AS1A0A0U1RR47 76 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 MESP2Q0VG99 397 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 KIRREL2Q6UWL6 708 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 OR1B1Q8NGR6 318 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 MRPL18Q9H0U6 180 aaKnown RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 ISG20L2Q9H9L3 353 aaKnown RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 MOSPD3O75425 235 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 PPP2CBP62714 309 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 TNFRSF9Q07011 255 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 SMIM20Q8N5G0 67 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 COL5A1P20908 1838 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 TRBV6-7A0A0A0MS04 114 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 A0A1W2PRE2 83 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 F5H697 171 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 PGFP49763 221 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 DLX6P56179 175 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 DLX4Q92988 240 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 SLC25A38Q96DW6 304 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 OR8B2Q96RD0 313 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 H3BMM0 161 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 GAGE2BQ13066 116 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 GAGE2EQ4V326 116 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 KLHDC9Q8NEP7 349 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 COX14Q96I36 57 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 OSTCQ9NRP0 149 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 GAGE2DQ9UEU5 116 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 PRSS21Q9Y6M0 314 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 FFAR1O14842 300 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 DUSP2Q05923 314 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 BCL6BQ8N143 479 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 LYPD1Q8N2G4 141 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 MYEOVQ96EZ4 313 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 HDHD3Q9BSH5 251 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 CLEC1BQ9P126 229 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 MRM2Q9UI43 246 aaKnown RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 LOC107984156A0A0G2JMH3 177 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF324BQ6AW86 544 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 ARL17AQ8IVW1 177 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 CEACAM16Q2WEN9 425 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 C16orf92Q96LL3 132 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 VN1R1Q9GZP7 353 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 HECTD1Q9ULT8 2610 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 CPAMD8Q8IZJ3 1885 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 A0A1W2PP11 408 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 FAM78AQ5JUQ0 283 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 H1FXQ92522 213 aaKnown RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TRMT61AQ96FX7 289 aaKnown RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 RHOVQ96L33 236 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 DMRTA2Q96SC8 542 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 ANAPC13Q9BS18 74 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TWSG1Q9GZX9 223 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 IKZF4Q9H2S9 585 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 THY1P04216 161 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 EMP1P54849 157 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TUSC5Q8IXB3 177 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 DNASE2O00115 360 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 IAPPP10997 89 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 UCP1P25874 307 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 INSM1Q01101 510 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 SRSF6Q13247 344 aaKnown RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 PIMREGQ9BSJ6 248 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TM2D1Q9BX74 207 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 CEACAM18A8MTB9 384 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 PITX1P78337 314 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 ZNF124Q15973 351 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 PRSS45Q7RTY3 260 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 RTN4RL2Q86UN3 420 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 OR8A1Q8NGG7 326 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 GSN-AS1Q9NRJ2 163 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 PLA2G10O15496 165 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 LHX8Q68G74 356 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 SLC23A3Q6PIS1 610 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 RFLNAQ6ZTI6 216 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 LYG1Q8N1E2 194 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 ASCL3Q9NQ33 180 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 DXOO77932 396 aaKnown RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 GRPP07492 148 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 CTLA4P16410 223 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 HOXA5P20719 270 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TNFAIP6P98066 277 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 EFNB1P98172 346 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM177Q53S58 311 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 FBXW9Q5XUX1 488 aa4.51□□□□□ -1.69
CSMD3-204ENST00000455883 Q6ZPB1 254 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-204ENST00000455883 MARCH3Q86UD3 253 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms