RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 GPHB5Q86YW7 130 aa13.99□□□□□ -0.17
MSH6-206ENST00000455383 DENRO43583 198 aaKnown RBP13.98□□□□□ -0.17
MSH6-206ENST00000455383 CREBL2O60519 120 aaPredicted RBP13.98□□□□□ -0.17
MSH6-206ENST00000455383 OR2C1O95371 312 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 HLA-AP01891 365 aaKnown RBP13.98□□□□□ -0.17
MSH6-206ENST00000455383 CBLN1P23435 193 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 IRF3Q14653 427 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 C10orf55Q5SWW7 151 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 SLC16A13Q7RTY0 426 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 MMD2Q8IY49 270 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 H1FOOQ8IZA3 346 aaPredicted RBP13.98□□□□□ -0.17
MSH6-206ENST00000455383 TMEM61Q8N0U2 210 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 TMEM203Q969S6 136 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 GGTLC1Q9BX51 225 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 ZNF257Q9Y2Q1 563 aa13.98□□□□□ -0.17
MSH6-206ENST00000455383 TMEM272A0A1B0GTI8 110 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 TEX22C9J3V5 150 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 LY6G6CO95867 125 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 MRPS15P82914 257 aaKnown RBP13.97□□□□□ -0.17
MSH6-206ENST00000455383 MED22Q15528 200 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 KLK9Q2XQG4 91 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 LIPKQ5VXJ0 399 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 Q6ZS49 121 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 SLC25A42Q86VD7 318 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 CACNG8Q8WXS5 425 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 UFD1Q92890 307 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 RAB3CQ96E17 227 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 ST6GALNAC5Q9BVH7 336 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 KLK9Q9UKQ9 250 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 RAB22AQ9UL26 194 aa13.97□□□□□ -0.17
MSH6-206ENST00000455383 TMEM213A2RRL7 107 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 NPIPB5A8MRT5 1133 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 A8MWP6 167 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 MFNGO00587 321 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 ARL6IP5O75915 188 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 ACTL6BO94805 426 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 ZNF57Q68EA5 555 aaPredicted RBP13.96□□□□□ -0.17
MSH6-206ENST00000455383 WFDC3Q8IUB2 231 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 MAFIPQ8WZ33 124 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 CCDC140Q96MF4 163 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 MLXQ9UH92 298 aa13.96□□□□□ -0.17
MSH6-206ENST00000455383 RBM7Q9Y580 266 aaKnown RBP13.96□□□□□ -0.17
MSH6-206ENST00000455383 LOC102724200A0A096LPH7 203 aaPredicted RBP13.95□□□□□ -0.18
MSH6-206ENST00000455383 RANBP1P43487 201 aa13.95□□□□□ -0.18
MSH6-206ENST00000455383 RPS25P62851 125 aaKnown RBP13.95□□□□□ -0.18
MSH6-206ENST00000455383 FANCD2OSQ96PS1 177 aa13.95□□□□□ -0.18
MSH6-206ENST00000455383 GINS4Q9BRT9 223 aa13.95□□□□□ -0.18
MSH6-206ENST00000455383 CENPOQ9BU64 300 aa13.95□□□□□ -0.18
MSH6-206ENST00000455383 FBXL7Q9UJT9 491 aa13.95□□□□□ -0.18
MSH6-206ENST00000455383 V9GY05 133 aa13.95□□□□□ -0.18
MSH6-206ENST00000455383 NUPR2A6NF83 97 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 HMX3A6NHT5 357 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 E7EUB6 86 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 PTGES3LE9PB15 166 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 RAB27BO00194 218 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 CRYGCP07315 174 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 IL6RP08887 468 aaPredicted RBP13.94□□□□□ -0.18
MSH6-206ENST00000455383 EWSR1Q01844 656 aaKnown RBP eCLIP13.94□□□□□ -0.185e-7■■■■□ 21.4
MSH6-206ENST00000455383 TRAM1Q15629 374 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 C19orf35Q6ZS72 473 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 OR52B4Q8NGK2 314 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 OR10R2Q8NGX6 335 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 OR51E2Q9H255 320 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 SELENOKQ9Y6D0 94 aa13.94□□□□□ -0.18
MSH6-206ENST00000455383 IGKV1D-8A0A087WSZ0 117 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 A0A1B0GW64 132 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 CXorf65A6NEN9 183 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 FCGR3BO75015 233 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 NDUFB8O95169 186 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 HIST1H1DP16402 221 aaKnown RBP13.93□□□□□ -0.18
MSH6-206ENST00000455383 GNB3P16520 340 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 PSMA1P25786 263 aaKnown RBP13.93□□□□□ -0.18
MSH6-206ENST00000455383 ARL3P36405 182 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 MAP2K4P45985 399 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 TNFRSF9Q07011 255 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 OGFRL1Q5TC84 451 aaPredicted RBP13.93□□□□□ -0.18
MSH6-206ENST00000455383 CEMP1Q6PRD7 247 aaPredicted RBP13.93□□□□□ -0.18
MSH6-206ENST00000455383 ZNF645Q8N7E2 425 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 UXS1Q8NBZ7 420 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 SLC2A9Q9NRM0 540 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 TP53TG1Q9Y2A0 90 aa13.93□□□□□ -0.18
MSH6-206ENST00000455383 IGLV2-14P01704 120 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 IGHV3-23P01764 117 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 ZNF735P0CB33 412 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 C8orf88P0DMB2 117 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 ATF4P18848 351 aaPredicted RBP13.92□□□□□ -0.18
MSH6-206ENST00000455383 CALRP27797 417 aaKnown RBP13.92□□□□□ -0.18
MSH6-206ENST00000455383 PSMD7P51665 324 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 RPL30P62888 115 aaKnown RBP13.92□□□□□ -0.18
MSH6-206ENST00000455383 PMS2P11Q13670 270 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 ANKRD55Q3KP44 614 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 FAM106AQ4KMX7 169 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 CLEC19AQ6UXS0 136 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 PUSL1Q8N0Z8 303 aaKnown RBP13.92□□□□□ -0.18
MSH6-206ENST00000455383 TMEM167AQ8TBQ9 72 aa13.92□□□□□ -0.18
MSH6-206ENST00000455383 FYTTD1Q96QD9 318 aaKnown RBP13.92□□□□□ -0.18
MSH6-206ENST00000455383 TRAV25A0A0B4J276 109 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 A0A0J9YWU9 116 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 ERICH4A6NGS2 130 aa13.91□□□□□ -0.18
MSH6-206ENST00000455383 GADD45AP24522 165 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms