RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 CBX3Q13185 183 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 FXYD3Q14802 87 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 BEAN1Q3B7T3 259 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 OXLD1Q5BKU9 147 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 ASPHD1Q5U4P2 390 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 ZNF66Q6ZN08 573 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 MRPL41Q8IXM3 137 aaKnown RBP8.8□□□□□ -1
HDAC9-217ENST00000455069 VKORC1L1Q8N0U8 176 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 LFNGQ8NES3 379 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 OR52I2Q8NH67 350 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 GRPEL2Q8TAA5 225 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 ABHD5Q8WTS1 349 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 MOB3AQ96BX8 217 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 RAX2Q96IS3 184 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 P2RX4Q99571 388 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 ZNF2Q9BSG1 426 aaPredicted RBP8.8□□□□□ -1
HDAC9-217ENST00000455069 KLK11Q9UBX7 282 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 SCOCQ9UIL1 159 aa8.8□□□□□ -1
HDAC9-217ENST00000455069 FOXA2Q9Y261 457 aaPredicted RBP8.8□□□□□ -1
HDAC9-217ENST00000455069 DNAH3Q8TD57 4116 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 RGS5O15539 181 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 SLC6A1P30531 599 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 GNB1P62873 340 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 VMA21Q3ZAQ7 101 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 AKIRIN2Q53H80 203 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 C10orf55Q5SWW7 151 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 KPRPQ5T749 579 aaPredicted RBP8.79□□□□□ -1
HDAC9-217ENST00000455069 UNQ5815/PRO19632Q6UWF5 114 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 ZNF491Q8N8L2 437 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 TEX45Q8NA69 505 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 OR4S2Q8NH73 311 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 C4orf3Q8WVX3 66 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 PRELID3BQ9Y3B1 194 aa8.79□□□□□ -1
HDAC9-217ENST00000455069 M0QYG6 137 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 IGLL1P15814 213 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 CD33P20138 364 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 RAB9AP51151 201 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 HERV-K104P61576 105 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 DGCR2P98153 550 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 PRSS8Q16651 343 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 ACTBL2Q562R1 376 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 PUSL1Q8N0Z8 303 aaKnown RBP8.78□□□□□ -1
HDAC9-217ENST00000455069 TCTEX1D1Q8N7M0 179 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 ZBTB34Q8NCN2 500 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 OR51H1Q8NH63 302 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 UBE2E2Q96LR5 201 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 DCUN1D5Q9BTE7 237 aa8.78□□□□□ -1
HDAC9-217ENST00000455069 TINAGL1Q9GZM7 467 aaPredicted RBP8.78□□□□□ -1
HDAC9-217ENST00000455069 NXF2Q9GZY0 626 aaKnown RBP8.78□□□□□ -1
HDAC9-217ENST00000455069 ZNF430Q9H8G1 570 aaPredicted RBP8.78□□□□□ -1
HDAC9-217ENST00000455069 A0A1B0GW64 132 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 I3L521 148 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 CCL24O00175 119 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 RBFOX2O43251 390 aaKnown RBP eCLIP8.77□□□□□ -1.01
HDAC9-217ENST00000455069 NOL3O60936 208 aaKnown RBP8.77□□□□□ -1.01
HDAC9-217ENST00000455069 TPPPO94811 219 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 RLN1P04808 185 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 APELAP0DMC3 54 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 MYCNOSP40205 109 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 FHL3Q13643 280 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 TNXAQ16473 311 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 VAX1Q5SQQ9 334 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 AADACL3Q5VUY0 350 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 SPAG16Q8N0X2 631 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 OR4D10Q8NGI6 311 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 OR5M8Q8NGP6 311 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 SRSF12Q8WXF0 261 aaKnown RBP8.77□□□□□ -1.01
HDAC9-217ENST00000455069 OR5B12Q96R08 314 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 C6orf62Q9GZU0 229 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-217ENST00000455069 ALX4Q9H161 411 aaPredicted RBP8.77□□□□□ -1.01
HDAC9-217ENST00000455069 MTFP1Q9UDX5 166 aa8.77□□□□□ -1.01
HDAC9-217ENST00000455069 E7EUB6 86 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 RBMXL2O75526 392 aaKnown RBP8.76□□□□□ -1.01
HDAC9-217ENST00000455069 PGLYRP1O75594 196 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-217ENST00000455069 KBTBD11O94819 623 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 S1PR2O95136 353 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 CNIH1O95406 144 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 PRB2P02812 416 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-217ENST00000455069 CD74P04233 296 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 CD3DP04234 171 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 KIR2DS2P43631 304 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 RUNX1Q01196 453 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 DEFA5Q01523 94 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 TMEM267Q0VDI3 215 aaPredicted RBP8.76□□□□□ -1.01
HDAC9-217ENST00000455069 CATR1Q13166 79 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 TMEM65Q6PI78 240 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 SSX9Q7RTT3 188 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 LHFPL1Q86WI0 220 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 OR5T1Q8NG75 326 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 OR6F1Q8NGZ6 308 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 TMEM167AQ8TBQ9 72 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 RHOVQ96L33 236 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 MS4A10Q96PG2 267 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 VSIG4Q9Y279 399 aa8.76□□□□□ -1.01
HDAC9-217ENST00000455069 MSGN1A6NI15 193 aa8.75□□□□□ -1.01
HDAC9-217ENST00000455069 CGB1A6NKQ9 187 aa8.75□□□□□ -1.01
HDAC9-217ENST00000455069 GABARAPH6UMI1 98 aa8.75□□□□□ -1.01
HDAC9-217ENST00000455069 GPR31O00270 319 aa8.75□□□□□ -1.01
HDAC9-217ENST00000455069 OR2A4O95047 310 aa8.75□□□□□ -1.01
HDAC9-217ENST00000455069 MYOD1P15172 320 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms