RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 LIN54Q6MZP7 749 aa12.4□□□□□ -0.42
RBM39-219ENST00000453310 C12orf54Q6X4T0 127 aa12.4□□□□□ -0.42
RBM39-219ENST00000453310 SLC35E3Q7Z769 313 aa12.4□□□□□ -0.42
RBM39-219ENST00000453310 TCTEX1D1Q8N7M0 179 aa12.4□□□□□ -0.42
RBM39-219ENST00000453310 SCGB3A2Q96PL1 93 aa12.4□□□□□ -0.42
RBM39-219ENST00000453310 C7orf50Q9BRJ6 194 aaKnown RBP12.4□□□□□ -0.42
RBM39-219ENST00000453310 RTBDNQ9BSG5 229 aaPredicted RBP12.4□□□□□ -0.42
RBM39-219ENST00000453310 VSIG4Q9Y279 399 aa12.4□□□□□ -0.42
RBM39-219ENST00000453310 CENPXA8MT69 81 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 HAX1O00165 279 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 KCNAB3O43448 404 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 S1PR2O95136 353 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 HPRT1P00492 218 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 HRASP01112 189 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 CRYGBP07316 175 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 VKORC1L1Q8N0U8 176 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 TEX45Q8NA69 505 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 WFDC12Q8WWY7 111 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 CLCC1Q96S66 551 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 PLEKHA2Q9HB19 425 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 COMMD9Q9P000 198 aa12.39□□□□□ -0.43
RBM39-219ENST00000453310 IGHV7-81A0A0B4J1V7 117 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 LINC01548A6NM66 108 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 H0Y980 276 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 FCN1O00602 326 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 PLA2G10O15496 165 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 CA2P00918 260 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 CCR6P51684 374 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 TAS2R31P59538 309 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 ZNF585BQ52M93 769 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 PPP1R27Q86WC6 154 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 FOXRED2Q8IWF2 684 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 KLHDC1Q8N7A1 406 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 RHOVQ96L33 236 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 SLC25A21Q9BQT8 299 aaPredicted RBP12.38□□□□□ -0.43
RBM39-219ENST00000453310 WNT10AQ9GZT5 417 aa12.38□□□□□ -0.43
RBM39-219ENST00000453310 FAM212BQ9NTI7 297 aaPredicted RBP12.38□□□□□ -0.43
RBM39-219ENST00000453310 C3orf85A0A1B0GTC6 90 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 AP4M1O00189 453 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 LYRM1O43325 122 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 UPK1BO75841 260 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 NQO2P16083 231 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 BTCP35070 178 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 LPAR6P43657 344 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 CX3CL1P78423 397 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 NDPQ00604 133 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 RBMS2Q15434 407 aaKnown RBP12.37□□□□□ -0.43
RBM39-219ENST00000453310 POU2AF1Q16633 256 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 SSX9Q7RTT3 188 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 VSTM2AQ8TAG5 236 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 NOL4LQ96MY1 436 aaPredicted RBP12.37□□□□□ -0.43
RBM39-219ENST00000453310 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 AIFM2Q9BRQ8 373 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 OR51J1Q9H342 316 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 NAA60Q9H7X0 242 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 PLXNB1O43157 2135 aa12.37□□□□□ -0.43
RBM39-219ENST00000453310 TEX13DA0A0J9YY54 714 aaPredicted RBP12.36□□□□□ -0.43
RBM39-219ENST00000453310 CRYM-AS1A6NIL9 109 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 ATP6V0E1O15342 81 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 OR2A4O95047 310 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 SERPINE2P07093 398 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 ERVK-16P61578 105 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 PJVKQ0ZLH3 352 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 PRSS8Q16651 343 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 MRGPRG-AS1Q2M3A8 158 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 ZNF562Q6V9R5 426 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 TMED4Q7Z7H5 227 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 PUSL1Q8N0Z8 303 aaKnown RBP12.36□□□□□ -0.43
RBM39-219ENST00000453310 STPG2Q8N412 459 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 C3orf56Q8N813 242 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 ADAD2Q8NCV1 583 aaKnown RBP12.36□□□□□ -0.43
RBM39-219ENST00000453310 DMBX1Q8NFW5 382 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 TMEM230Q96A57 120 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 R3HDM4Q96D70 268 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 OR2A7Q96R45 310 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 PARP11Q9NR21 331 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 LINC00527Q9UJ94 153 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 ANK2Q01484 3957 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 TENM1Q9UKZ4 2725 aa12.36□□□□□ -0.43
RBM39-219ENST00000453310 MARCH11A6NNE9 402 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 CREBL2O60519 120 aaPredicted RBP12.35□□□□□ -0.43
RBM39-219ENST00000453310 B3GALNT1O75752 331 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 KBTBD11O94819 623 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 NDUFB6O95139 128 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 IGF1P05019 195 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 GNB1P62873 340 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 SSBP2P81877 361 aaPredicted RBP12.35□□□□□ -0.43
RBM39-219ENST00000453310 SP6Q3SY56 376 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 OR4A47Q6IF82 309 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 TMEM167AQ8TBQ9 72 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
RBM39-219ENST00000453310 CHPT1Q8WUD6 406 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 ZNF747Q9BV97 191 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
RBM39-219ENST00000453310 TMEM140Q9NV12 185 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 BET1LQ9NYM9 111 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 TBC1D24Q9ULP9 559 aa12.35□□□□□ -0.43
RBM39-219ENST00000453310 STAB1Q9NY15 2570 aa12.34□□□□□ -0.43
RBM39-219ENST00000453310 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
RBM39-219ENST00000453310 CNIH1O95406 144 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms