RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 RNF152Q8N8N0 203 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 GRPEL2Q8TAA5 225 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 RBMXL1Q96E39 390 aaKnown RBP9.45□□□□□ -0.9
SMPD4-212ENST00000451542 ABHD1Q96SE0 405 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 PHB2Q99623 299 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 SLIRPQ9GZT3 109 aaKnown RBP9.45□□□□□ -0.9
SMPD4-212ENST00000451542 MIXL1Q9H2W2 232 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 SLA2Q9H6Q3 261 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 KLK11Q9UBX7 282 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 NUBP2Q9Y5Y2 271 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 MGAM2Q2M2H8 2515 aa9.45□□□□□ -0.9
SMPD4-212ENST00000451542 FABP12A6NFH5 140 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 ADARB2-AS1A8MUL3 147 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 G3V318 75 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 MPPED1O15442 326 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 OR2A4O95047 310 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 RAB3DO95716 219 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 HPRT1P00492 218 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 RPLP1P05386 114 aaKnown RBP9.44□□□□□ -0.9
SMPD4-212ENST00000451542 CRYGBP07316 175 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 PSMB8P28062 276 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 PPIFP30405 207 aaKnown RBP9.44□□□□□ -0.9
SMPD4-212ENST00000451542 GNRHRP30968 328 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 MYCNOSP40205 109 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 UCP3P55916 312 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 ERVK-16P61578 105 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 CFHR3Q02985 330 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 MEF2DQ14814 521 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 TNXAQ16473 311 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 PRSS8Q16651 343 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 HIST2H2BDQ6DRA6 164 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 ZNF818PQ6ZRF7 136 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 SLC38A6Q8IZM9 456 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 TMEM229BQ8NBD8 167 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 MINDY2Q8NBR6 621 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 LFNGQ8NES3 379 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 OR51H1Q8NH63 302 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 SMIM4Q8WVI0 70 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 RHOVQ96L33 236 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 UBE2E2Q96LR5 201 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 OR2A7Q96R45 310 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 SPIN2AQ99865 258 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 SPIN2BQ9BPZ2 258 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 GPR61Q9BZJ8 451 aa9.44□□□□□ -0.9
SMPD4-212ENST00000451542 SRRM4A7MD48 611 aaKnown RBP9.43□□□□□ -0.9
SMPD4-212ENST00000451542 DISC1C4P0D8 188 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 H3BUA1 57 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 DUS4LO95620 317 aaKnown RBP9.43□□□□□ -0.9
SMPD4-212ENST00000451542 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 SAA1P0DJI8 122 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-212ENST00000451542 NQO2P16083 231 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 F2RP25116 425 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 MAS1LP35410 378 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 ECI1P42126 302 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 RAB9AP51151 201 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 TAS2R31P59538 309 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 NDPQ00604 133 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 EIF4EBP1Q13541 118 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-212ENST00000451542 STEAP1BQ6NZ63 245 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 OR4A5Q8NH83 315 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 ZNF486Q96H40 463 aaPredicted RBP9.43□□□□□ -0.9
SMPD4-212ENST00000451542 FAM103A1Q9BTL3 118 aaKnown RBP9.43□□□□□ -0.9
SMPD4-212ENST00000451542 NXF2Q9GZY0 626 aaKnown RBP9.43□□□□□ -0.9
SMPD4-212ENST00000451542 PLEKHA2Q9HB19 425 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 ZNF355PQ9NSJ1 428 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 VSIG4Q9Y279 399 aa9.43□□□□□ -0.9
SMPD4-212ENST00000451542 TNCP24821 2201 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 M0QYG6 137 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 PGLYRP1O75594 196 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-212ENST00000451542 CD3DP04234 171 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 RLN1P04808 185 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 PGAM2P15259 253 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 TNFSF8P32971 234 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 DGCR2P98153 550 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 C8orf86Q6ZUL3 223 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 SLC25A42Q86VD7 318 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 CCDC71LQ8N9Z2 235 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 DMBX1Q8NFW5 382 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 ZFAND1Q8TCF1 268 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 C4orf3Q8WVX3 66 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 DGCR14Q96DF8 476 aaKnown RBP9.42□□□□□ -0.9
SMPD4-212ENST00000451542 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
SMPD4-212ENST00000451542 FXYD6Q9H0Q3 95 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 HRASLSQ9HDD0 168 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 TPSG1Q9NRR2 321 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 FAM212BQ9NTI7 297 aaPredicted RBP9.42□□□□□ -0.9
SMPD4-212ENST00000451542 COMMD9Q9P000 198 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 FBXO7Q9Y3I1 522 aa9.42□□□□□ -0.9
SMPD4-212ENST00000451542 A0A0G2JLM5 398 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 DPPA5A6NC42 116 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 MSGN1A6NI15 193 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 CCL24O00175 119 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 KBTBD11O94819 623 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 CD74P04233 296 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 AKAIN1P0CW23 69 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 EGR2P11161 476 aaPredicted RBP9.41□□□□□ -0.9
SMPD4-212ENST00000451542 PTBP1P26599 531 aaKnown RBP eCLIP9.41□□□□□ -0.97e-7■■■■□ 19.6
SMPD4-212ENST00000451542 FAUP35544 74 aaKnown RBP9.41□□□□□ -0.9
SMPD4-212ENST00000451542 TPPP2P59282 170 aa9.41□□□□□ -0.9
SMPD4-212ENST00000451542 AP3S2P59780 193 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms