RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 IDO2Q6ZQW0 420 aa14.9□□□□□ -0.02
USP40-207ENST00000450940 SRSF12Q8WXF0 261 aaKnown RBP14.9□□□□□ -0.02
USP40-207ENST00000450940 ZNF430Q9H8G1 570 aaPredicted RBP14.9□□□□□ -0.02
USP40-207ENST00000450940 MRPS7Q9Y2R9 242 aaKnown RBP14.9□□□□□ -0.02
USP40-207ENST00000450940 TRIM64CA6NLI5 447 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 CREBL2O60519 120 aaPredicted RBP14.89□□□□□ -0.03
USP40-207ENST00000450940 SAP30O75446 220 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 TNFAIP8O95379 198 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 TGFBR1P36897 503 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 RPS19P39019 145 aaKnown RBP14.89□□□□□ -0.03
USP40-207ENST00000450940 TNXAQ16473 311 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 ZNF343Q6P1L6 599 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 MMD2Q8IY49 270 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 MFSD4AQ8N468 514 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 ADAD2Q8NCV1 583 aaKnown RBP14.89□□□□□ -0.03
USP40-207ENST00000450940 USMG5Q96IX5 58 aa14.89□□□□□ -0.03
USP40-207ENST00000450940 XRCC3O43542 346 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 OR9G9P0C7N8 305 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 ZP3P21754 424 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 FCGR2CP31995 323 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 CBX5P45973 191 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 ARPC4P59998 168 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 DYRK1AQ13627 763 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 OR4S2Q8NH73 311 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 DCUN1D5Q9BTE7 237 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 VCX3AQ9NNX9 186 aa14.88□□□□□ -0.03
USP40-207ENST00000450940 TENM3Q9P273 2699 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 RBMXL2O75526 392 aaKnown RBP14.87□□□□□ -0.03
USP40-207ENST00000450940 KLF5Q13887 457 aaPredicted RBP14.87□□□□□ -0.03
USP40-207ENST00000450940 PUSL1Q8N0Z8 303 aaKnown RBP14.87□□□□□ -0.03
USP40-207ENST00000450940 ZBTB34Q8NCN2 500 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 OR6Q1Q8NGQ2 317 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 TCTEX1D2Q8WW35 142 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 ACOT12Q8WYK0 555 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 SNAPC3Q92966 411 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 S100A16Q96FQ6 103 aaKnown RBP14.87□□□□□ -0.03
USP40-207ENST00000450940 PHB2Q99623 299 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 SPIN2AQ99865 258 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 SPIN2BQ9BPZ2 258 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 COA4Q9NYJ1 87 aa14.87□□□□□ -0.03
USP40-207ENST00000450940 TRBV9A0A0B4J1U6 114 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 PPYP01298 95 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 PTHLHP12272 177 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 SPNP16150 400 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 OR2B11Q5JQS5 317 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 TTC9CQ8N5M4 171 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 OR5AP2Q8NGF4 316 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 OR13F1Q8NGS4 319 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 VSTM2AQ8TAG5 236 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 TMEM167AQ8TBQ9 72 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 GIMAP1Q8WWP7 306 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 OR4C12Q96R67 309 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 CCL28Q9NRJ3 127 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 TAS2R8Q9NYW2 309 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 PEF1Q9UBV8 284 aaKnown RBP14.86□□□□□ -0.03
USP40-207ENST00000450940 ANAPC10Q9UM13 185 aa14.86□□□□□ -0.03
USP40-207ENST00000450940 ANKRD34BA5PLL1 514 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 ACTL6BO94805 426 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 OR2A4O95047 310 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 APELAP0DMC3 54 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 KIR2DS2P43631 304 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 UBE2NLQ5JXB2 153 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 VKORC1L1Q8N0U8 176 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 SECTM1Q8WVN6 248 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 OR2A7Q96R45 310 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 ELOVL1Q9BW60 279 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 SMAD5-AS1Q9Y6J3 95 aa14.85□□□□□ -0.03
USP40-207ENST00000450940 FAM223BA6NKX1 122 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 RBFOX2O43251 390 aaKnown RBP eCLIP14.84□□□□□ -0.03
USP40-207ENST00000450940 KBTBD11O94819 623 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 LY86O95711 162 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 IGLV1-51P01701 117 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 MAS1LP35410 378 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 ZNF45Q02386 682 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 FAM223AQ8IWN6 122 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 SLC25A46Q96AG3 418 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 KCTD12Q96CX2 325 aaKnown RBP14.84□□□□□ -0.03
USP40-207ENST00000450940 GPHA2Q96T91 129 aa14.84□□□□□ -0.03
USP40-207ENST00000450940 TEX22C9J3V5 150 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 MPPED1O15442 326 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 HRASP01112 189 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 GP9P14770 177 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 NAT1P18440 290 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 LSM3P62310 102 aaKnown RBP14.83□□□□□ -0.04
USP40-207ENST00000450940 DEFA5Q01523 94 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 C10orf55Q5SWW7 151 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 DHRS11Q6UWP2 260 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 IL34Q6ZMJ4 242 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 SAMD12Q8N8I0 201 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 SLC5A7Q9GZV3 580 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 AKIP1Q9NQ31 210 aa14.83□□□□□ -0.04
USP40-207ENST00000450940 TRBV12-3P01733 135 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 IL6RP08887 468 aaPredicted RBP14.82□□□□□ -0.04
USP40-207ENST00000450940 TAS2R20P59543 309 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 RHOGP84095 191 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 KLK9Q2XQG4 91 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 SLC25A42Q86VD7 318 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 WWC2-AS2Q96NR7 200 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 AIFM2Q9BRQ8 373 aa14.82□□□□□ -0.04
USP40-207ENST00000450940 KLK9Q9UKQ9 250 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms