RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SRSF2Q01130 221 aaKnown RBP6.09□□□□□ -1.43
BEST1-202ENST00000449131 FHL1Q13642 323 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 WDR73Q6P4I2 378 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 C1QTNF5Q9BXJ0 243 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 AAMDCQ9H7C9 122 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 DEPPQ9NTK1 212 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 SLC25A10Q9UBX3 287 aaPredicted RBP6.09□□□□□ -1.43
BEST1-202ENST00000449131 THADAQ6YHU6 1953 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 PPIAL4EA0A075B759 164 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 ZNF785A8K8V0 405 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 PPIAL4DF5H284 164 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 SLC31A2O15432 143 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 PPIAL4FP0DN26 164 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 SSTR5P35346 364 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 WNT5AP41221 380 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 MIC13Q5XKP0 118 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 PDPNQ86YL7 162 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 FAM89BQ8N5H3 189 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 FDCSPQ8NFU4 85 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 SRD5A3Q9H8P0 318 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 PITPNC1Q9UKF7 332 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 PPIAL4AQ9Y536 164 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 INSIG2Q9Y5U4 225 aa6.09□□□□□ -1.43
BEST1-202ENST00000449131 LOC102723971A0A1B0GUV8 181 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 MARCH11A6NNE9 402 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 NDUFS8O00217 210 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 TRANK1O15050 2925 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 CCL1P22362 96 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 UCP1P25874 307 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 IER3P46695 156 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 SSX7Q7RTT5 188 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 KLHDC1Q8N7A1 406 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 FGFBP3Q8TAT2 258 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 RAB1CQ92928 201 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 LRRK1Q38SD2 2015 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 K7N7A8 449 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 PAX6P26367 422 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 OR10J1P30954 320 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 CCL20P78556 96 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 C1orf185Q5T7R7 199 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 VKORC1L1Q8N0U8 176 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 TCTEX1D1Q8N7M0 179 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 C1orf162Q8NEQ5 155 aaPredicted RBP6.08□□□□□ -1.44
BEST1-202ENST00000449131 CALYQ9NYX4 217 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 IGHV3-72A0A0B4J1Y9 119 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 SNURFLB1AK76 121 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 FAM90A26D6RGX4 464 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 CTSSP25774 331 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 FAM166AQ6J272 317 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 ZIC4Q8N9L1 334 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 LSM10Q969L4 123 aaKnown RBP6.08□□□□□ -1.44
BEST1-202ENST00000449131 WBP1Q96G27 269 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 CLDN16Q9Y5I7 305 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 ARHGAP21Q5T5U3 1957 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 ZNF716A6NP11 495 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 LDLRAD4O15165 306 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 C1orf174Q8IYL3 243 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 ABHD12Q8N2K0 398 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 OR1L6Q8NGR2 347 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 SMIM8Q96KF7 97 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 RNF2Q99496 336 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 PCGF1Q9BSM1 259 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 RAB1BQ9H0U4 201 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 CHODLQ9H9P2 273 aa6.08□□□□□ -1.44
BEST1-202ENST00000449131 COL6A3P12111 3177 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.07□□□□□ -1.44
BEST1-202ENST00000449131 IGKV1D-13A0A0B4J2D9 117 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 C12orf77C9JDV5 145 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 IGKV1-13P0DP09 117 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 ADCYAP1P18509 176 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 PTGDSP41222 190 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 HNRNPA3P51991 378 aaKnown RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 RANP62826 216 aaKnown RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 C10orf113Q5VZT2 155 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 Q6ZT83 130 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 FA2HQ7L5A8 372 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 ZNRF1Q8ND25 227 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 WDR61Q9GZS3 305 aaKnown RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 TMEM140Q9NV12 185 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 CARHSP1Q9Y2V2 147 aaKnown RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 USP34Q70CQ2 3546 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 USF1P22415 310 aaPredicted RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 CEACAM3P40198 252 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 FOXG1P55316 489 aaPredicted RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 ZFP36L1Q07352 338 aaKnown RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 HLA-DRB5Q30154 266 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 VWA1Q6PCB0 445 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 BMPERQ8N8U9 685 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 GGACTQ9BVM4 153 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 AMMECR1Q9Y4X0 333 aaPredicted RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 LAMA1P25391 3075 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 IGKV1-12A0A0C4DH73 117 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 PINLYPA6NC86 204 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 MPDU1O75352 247 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 IGKV1D-12P01611 117 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 CSN3P07498 182 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 CELA3BP08861 270 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 PSG7Q13046 419 aa6.07□□□□□ -1.44
BEST1-202ENST00000449131 ZNF385CQ66K41 422 aaPredicted RBP6.07□□□□□ -1.44
BEST1-202ENST00000449131 ABLIM2Q6H8Q1 611 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms