RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 TRIM77I1YAP6 450 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 S1PR2O95136 353 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 EBI3Q14213 229 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 AANATQ16613 207 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 DEFB112Q30KQ8 113 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 TMEM177Q53S58 311 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 LGI3Q8N145 548 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 RBMXL1Q96E39 390 aaKnown RBP11.29□□□□□ -0.6
SHMT2-203ENST00000449049 PHB2Q99623 299 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 OR51J1Q9H342 316 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 GSX1Q9H4S2 264 aaPredicted RBP11.29□□□□□ -0.6
SHMT2-203ENST00000449049 COMMD9Q9P000 198 aa11.29□□□□□ -0.6
SHMT2-203ENST00000449049 CELSR1Q9NYQ6 3014 aa11.28□□□□□ -0.6
SHMT2-203ENST00000449049 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
SHMT2-203ENST00000449049 THNSL2Q86YJ6 484 aa11.28□□□□□ -0.6
SHMT2-203ENST00000449049 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
SHMT2-203ENST00000449049 C12orf45Q8N5I9 185 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-203ENST00000449049 OR4C13Q8NGP0 309 aa11.28□□□□□ -0.6
SHMT2-203ENST00000449049 OSR1Q8TAX0 266 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-203ENST00000449049 FLYWCH2Q96CP2 140 aaKnown RBP11.28□□□□□ -0.6
SHMT2-203ENST00000449049 PRDM13Q9H4Q3 707 aa11.28□□□□□ -0.6
SHMT2-203ENST00000449049 ZANQ9Y493 2812 aa11.28□□□□□ -0.6
SHMT2-203ENST00000449049 MDFIC2A0A1B0GVS7 189 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 DBX1A6NMT0 343 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 IGKV1D-33P01593 117 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 IGKV1-33P01594 117 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 SNRNP70P08621 437 aaKnown RBP11.27□□□□□ -0.6
SHMT2-203ENST00000449049 LRRC75BQ2VPJ9 315 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 TOR2AQ5JU69 321 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 TMEM268Q5VZI3 342 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 ZNF695Q8IW36 515 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 C9orf62Q8N4C0 152 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 PIFOQ8TCI5 191 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 C22orf15Q8WYQ4 148 aa11.27□□□□□ -0.6
SHMT2-203ENST00000449049 RBPMSQ93062 196 aaKnown RBP11.27□□□□□ -0.6
SHMT2-203ENST00000449049 PIGBOS1A0A0B4J2F0 54 aa11.27□□□□□ -0.61
SHMT2-203ENST00000449049 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
SHMT2-203ENST00000449049 ZNF48Q96MX3 618 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-203ENST00000449049 RNF5Q99942 180 aa11.27□□□□□ -0.61
SHMT2-203ENST00000449049 CDC42EP3Q9UKI2 254 aa11.27□□□□□ -0.61
SHMT2-203ENST00000449049 NOTCH2Q04721 2471 aa11.27□□□□□ -0.61
SHMT2-203ENST00000449049 DUXBA0A1W2PPF3 345 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 SMLR1H3BR10 107 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 MOSP00540 346 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 CD24P25063 80 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 POU2AF1Q16633 256 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 FBLN7Q53RD9 439 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 Q8N6K4 173 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 SLC35G3Q8N808 338 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 OR8H1Q8NGG4 311 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 R3HDM4Q96D70 268 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 SEC22AQ96IW7 307 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 EAF1Q96JC9 268 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-203ENST00000449049 RITA1Q96K30 269 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 HARBI1Q96MB7 349 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 SSX3Q99909 188 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 HRASP01112 189 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 IGKV1-5P01602 117 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 NQO2P16083 231 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 LYZL2Q7Z4W2 148 aa11.26□□□□□ -0.61
SHMT2-203ENST00000449049 MARCH11A6NNE9 402 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 SRRM4A7MD48 611 aaKnown RBP11.25□□□□□ -0.61
SHMT2-203ENST00000449049 SSNA1O43805 119 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 ATG12O94817 140 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 IGLV2-23P01705 113 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 LGALS7P47929 136 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
SHMT2-203ENST00000449049 Q6YL49 198 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 LRRC20Q8TCA0 184 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 TEX15Q9BXT5 2789 aa11.25□□□□□ -0.61
SHMT2-203ENST00000449049 KRASP01116 189 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 P0C879 139 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 VDAC1P21796 283 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 G6PCP35575 357 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 IER3P46695 156 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 HES1Q14469 280 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 TEX261Q6UWH6 196 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 Q71RC1 249 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-203ENST00000449049 UXS1Q8NBZ7 420 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 LSM10Q969L4 123 aaKnown RBP11.24□□□□□ -0.61
SHMT2-203ENST00000449049 RAB18Q9NP72 206 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 TMED3Q9Y3Q3 217 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 U3KQ87 197 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 H3BUX3 64 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 ADAP1O75689 374 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 TMEM11P17152 192 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 HLA-GP17693 338 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 NMSQ5H8A3 153 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 ZDHHC16Q969W1 377 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 RHOVQ96L33 236 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 TSNAXQ99598 290 aaKnown RBP11.24□□□□□ -0.61
SHMT2-203ENST00000449049 MED28Q9H204 178 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 TCF19Q9Y242 345 aa11.24□□□□□ -0.61
SHMT2-203ENST00000449049 SVEP1Q4LDE5 3571 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 INAFM1C9JVW0 142 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 SPDEFO95238 335 aa11.23□□□□□ -0.61
SHMT2-203ENST00000449049 IL6RP08887 468 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms