RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TMEM267Q0VDI3 215 aaPredicted RBP11.39□□□□□ -0.59
USP39-206ENST00000448971 FXYD3Q14802 87 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 MSMO1Q15800 293 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 AADACL3Q5VUY0 350 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 FOXB2Q5VYV0 432 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 UNQ5815/PRO19632Q6UWF5 114 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 ZNF562Q6V9R5 426 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 IDO2Q6ZQW0 420 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 ZNF818PQ6ZRF7 136 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 C18orf65Q6ZTR6 163 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 MFSD4AQ8N468 514 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 TCTEX1D1Q8N7M0 179 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 ZBTB34Q8NCN2 500 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 WFDC9Q8NEX5 89 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 C15orf40Q8WUR7 153 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 GPHA2Q96T91 129 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 FXYD6Q9H0Q3 95 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 MIXL1Q9H2W2 232 aa11.39□□□□□ -0.59
USP39-206ENST00000448971 FOXA2Q9Y261 457 aaPredicted RBP11.39□□□□□ -0.59
USP39-206ENST00000448971 CTDSP2O14595 271 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 SAA1P0DJI8 122 aaPredicted RBP11.38□□□□□ -0.59
USP39-206ENST00000448971 PSMB8P28062 276 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 SLC6A1P30531 599 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 KIR2DS2P43631 304 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 CRIP2P52943 208 aaPredicted RBP11.38□□□□□ -0.59
USP39-206ENST00000448971 UBE2KP61086 200 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 TNXAQ16473 311 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 ACTBL2Q562R1 376 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 OR6F1Q8NGZ6 308 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 OR51H1Q8NH63 302 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 MOB3AQ96BX8 217 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 PHB2Q99623 299 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 CEPT1Q9Y6K0 416 aa11.38□□□□□ -0.59
USP39-206ENST00000448971 SRRM4A7MD48 611 aaKnown RBP11.37□□□□□ -0.59
USP39-206ENST00000448971 ACTL6BO94805 426 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 PPIFP30405 207 aaKnown RBP11.37□□□□□ -0.59
USP39-206ENST00000448971 PJVKQ0ZLH3 352 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 EIF4EBP1Q13541 118 aaPredicted RBP11.37□□□□□ -0.59
USP39-206ENST00000448971 IL18Q14116 193 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 RNASE10Q5GAN6 216 aaKnown RBP11.37□□□□□ -0.59
USP39-206ENST00000448971 SPAG16Q8N0X2 631 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 RNF152Q8N8N0 203 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 TEX45Q8NA69 505 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 POC5Q8NA72 575 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 LFNGQ8NES3 379 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 OR52I2Q8NH67 350 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 DIRAS2Q96HU8 199 aa11.37□□□□□ -0.59
USP39-206ENST00000448971 M0QYG6 137 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 ARPC1BO15143 372 aaKnown RBP11.36□□□□□ -0.59
USP39-206ENST00000448971 TPPPO94811 219 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 RLN1P04808 185 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 IFNA6P05013 189 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 CRYGBP07316 175 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 CD40LGP29965 261 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 RAB25P57735 213 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 MRPS10P82664 201 aaKnown RBP11.36□□□□□ -0.59
USP39-206ENST00000448971 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 PYHIN1Q6K0P9 492 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 DHRS11Q6UWP2 260 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 ETV3LQ6ZN32 361 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 LYSMD2Q8IV50 215 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 CMTM1Q8IZ96 169 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 VKORC1L1Q8N0U8 176 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 MINDY2Q8NBR6 621 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 OR5M8Q8NGP6 311 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 VSTM2AQ8TAG5 236 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 CASTOR1Q8WTX7 329 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 C4orf3Q8WVX3 66 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 FCAMRQ8WWV6 532 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 DUX3Q96PT4 197 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 SLIRPQ9GZT3 109 aaKnown RBP11.36□□□□□ -0.59
USP39-206ENST00000448971 KLK11Q9UBX7 282 aa11.36□□□□□ -0.59
USP39-206ENST00000448971 RSL24D1Q9UHA3 163 aaKnown RBP11.36□□□□□ -0.59
USP39-206ENST00000448971 K7EIL1 84 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 MPPED1O15442 326 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 SOX15O60248 233 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 IGLV1-40P01703 118 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 EGR2P11161 476 aaPredicted RBP11.35□□□□□ -0.59
USP39-206ENST00000448971 IGLL1P15814 213 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 S100GP29377 79 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 CDX1P47902 265 aaPredicted RBP11.35□□□□□ -0.59
USP39-206ENST00000448971 SSBP2P81877 361 aaPredicted RBP11.35□□□□□ -0.59
USP39-206ENST00000448971 DGCR2P98153 550 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 PRSS8Q16651 343 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 AKIRIN2Q53H80 203 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 C19orf54Q5BKX5 351 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 SSX9Q7RTT3 188 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 OR5B12Q96R08 314 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 ABHD1Q96SE0 405 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 KLK15Q9H2R5 256 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 ZNF430Q9H8G1 570 aaPredicted RBP11.35□□□□□ -0.59
USP39-206ENST00000448971 ZNF355PQ9NSJ1 428 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 MTFP1Q9UDX5 166 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 NUBP2Q9Y5Y2 271 aa11.35□□□□□ -0.59
USP39-206ENST00000448971 GABARAPH6UMI1 98 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 GPR31O00270 319 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 RAMP3O60896 148 aa11.34□□□□□ -0.59
USP39-206ENST00000448971 KBTBD11O94819 623 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms