RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 ZNF785A8K8V0 405 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 CASQ2O14958 399 aaPredicted RBP10.06□□□□□ -0.8
HMGB3-204ENST00000448905 DHFRP00374 187 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 FOLR2P14207 255 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 GNB3P16520 340 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 KIR2DS2P43631 304 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 RPS25P62851 125 aaKnown RBP10.06□□□□□ -0.8
HMGB3-204ENST00000448905 DEFA5Q01523 94 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 MLLT11Q13015 90 aaPredicted RBP10.06□□□□□ -0.8
HMGB3-204ENST00000448905 IRF3Q14653 427 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 CDK10Q15131 360 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 ANKRD55Q3KP44 614 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 FAM106AQ4KMX7 169 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 HES5Q5TA89 166 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 IDO2Q6ZQW0 420 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 DEFB125Q8N687 156 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 VSTM2AQ8TAG5 236 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 MRPS7Q9Y2R9 242 aaKnown RBP10.06□□□□□ -0.8
HMGB3-204ENST00000448905 KCNK7Q9Y2U2 307 aa10.06□□□□□ -0.8
HMGB3-204ENST00000448905 TMEM272A0A1B0GTI8 110 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 BMPR1BO00238 502 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 RGS10O43665 173 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 PRH1P02810 166 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 CD36P16671 472 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 RAB6AP20340 208 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 C15orf32Q32M92 178 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 DDB2Q92466 427 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 MGLLQ99685 303 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 OR51E2Q9H255 320 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 DUSP21Q9H596 190 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 ZNF430Q9H8G1 570 aaPredicted RBP10.05□□□□□ -0.8
HMGB3-204ENST00000448905 SRD5A3Q9H8P0 318 aa10.05□□□□□ -0.8
HMGB3-204ENST00000448905 ZNF320A2RRD8 509 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 LGALS9O00182 355 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 FCGR3BO75015 233 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 OR2J3O76001 311 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 OR2C1O95371 312 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 CD7P09564 240 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 HIST1H1DP16402 221 aaKnown RBP10.04□□□□□ -0.8
HMGB3-204ENST00000448905 FABP5Q01469 135 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 MRGPRG-AS1Q2M3A8 158 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 Q6ZS49 121 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 GPHB5Q86YW7 130 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 H1FOOQ8IZA3 346 aaPredicted RBP10.04□□□□□ -0.8
HMGB3-204ENST00000448905 ZNF645Q8N7E2 425 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 MAFIPQ8WZ33 124 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 AIFM2Q9BRQ8 373 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 ST6GALNAC5Q9BVH7 336 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 FBXL7Q9UJT9 491 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 ZNF257Q9Y2Q1 563 aa10.04□□□□□ -0.8
HMGB3-204ENST00000448905 TRAV1-2A0A0B4J238 106 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 RBMY1BA6NDE4 496 aaKnown RBP10.03□□□□□ -0.8
HMGB3-204ENST00000448905 RBMY1EA6NEQ0 496 aaKnown RBP10.03□□□□□ -0.8
HMGB3-204ENST00000448905 C2orf70A6NJV1 201 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 IFITM5A6NNB3 132 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 LINC00473A8K010 186 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 J3QRK9 145 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 RBMXL2O75526 392 aaKnown RBP10.03□□□□□ -0.8
HMGB3-204ENST00000448905 RBMY1DP0C7P1 496 aaKnown RBP10.03□□□□□ -0.8
HMGB3-204ENST00000448905 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
HMGB3-204ENST00000448905 CBLN1P23435 193 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 DTYMKP23919 212 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 MYL9P24844 172 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 MAS1LP35410 378 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 OR4A47Q6IF82 309 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 KCTD9Q7L273 389 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 OR2A7Q96R45 310 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 FAM110AQ9BQ89 295 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 ATG5Q9H1Y0 275 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 RETNQ9HD89 108 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 SLC2A9Q9NRM0 540 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 OR2W1Q9Y3N9 320 aa10.03□□□□□ -0.8
HMGB3-204ENST00000448905 DNAH1Q9P2D7 4330 aa10.02□□□□□ -0.8
HMGB3-204ENST00000448905 CSMD3Q7Z407 3707 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 RAB27BO00194 218 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 MFNGO00587 321 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 DEFA4P12838 97 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 HIST1H1BP16401 226 aaKnown RBP10.02□□□□□ -0.81
HMGB3-204ENST00000448905 ARL3P36405 182 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 ZNF45Q02386 682 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 CDNFQ49AH0 187 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 ZNF57Q68EA5 555 aaPredicted RBP10.02□□□□□ -0.81
HMGB3-204ENST00000448905 PRSS48Q7RTY5 328 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 OR52B4Q8NGK2 314 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 OR4S2Q8NH73 311 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 EEF1AKMT3Q96AZ1 226 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 FYTTD1Q96QD9 318 aaKnown RBP10.02□□□□□ -0.81
HMGB3-204ENST00000448905 HSD17B10Q99714 261 aaKnown RBP10.02□□□□□ -0.81
HMGB3-204ENST00000448905 DCSTAMPQ9H295 470 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 ZC4H2Q9NQZ6 224 aa10.02□□□□□ -0.81
HMGB3-204ENST00000448905 NPIPB5A8MRT5 1133 aa10.01□□□□□ -0.81
HMGB3-204ENST00000448905 PPP5D1E7EU14 171 aa10.01□□□□□ -0.81
HMGB3-204ENST00000448905 HRASP01112 189 aa10.01□□□□□ -0.81
HMGB3-204ENST00000448905 HLA-DQB1P01920 261 aa10.01□□□□□ -0.81
HMGB3-204ENST00000448905 RAB3BP20337 219 aa10.01□□□□□ -0.81
HMGB3-204ENST00000448905 RPL27AP46776 148 aaKnown RBP10.01□□□□□ -0.81
HMGB3-204ENST00000448905 PLA2G7Q13093 441 aa10.01□□□□□ -0.81
HMGB3-204ENST00000448905 RBPMS2Q6ZRY4 209 aaKnown RBP10.01□□□□□ -0.81
HMGB3-204ENST00000448905 WDR89Q96FK6 387 aaPredicted RBP10.01□□□□□ -0.81
HMGB3-204ENST00000448905 C5orf30Q96GV9 206 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms