RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 HPRT1P00492 218 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 IGHV3-43DP0DP04 118 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 NDUFB7P17568 137 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 EDDM3BP56851 147 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 UBE2G2P60604 165 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 SSX2Q16385 188 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 SMIM21Q3B7S5 101 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 DERL1Q9BUN8 251 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 METRNQ9UJH8 293 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 PRSS46E5RG02 174 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 GALR2O43603 387 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-204ENST00000447182 EGR1P18146 543 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 HOXA4Q00056 320 aaPredicted RBP15.86■□□□□ 0.13
SDCBP-204ENST00000447182 TREML4Q6UXN2 200 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 SFRP2Q96HF1 295 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 IL17BQ9UHF5 180 aa15.86■□□□□ 0.13
SDCBP-204ENST00000447182 PROP1O75360 226 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 IGKV3-15P01624 115 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 C1QTNF9P0C862 333 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 STAG3L2P0CL84 134 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 STAG3L3P0CL85 134 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 Q6ZT83 130 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 TPRX1Q8N7U7 411 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 RFESDQ8TAC1 157 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 TUBG2Q9NRH3 451 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 ELOVL5Q9NYP7 299 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 TRIOBPQ9H2D6 2365 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 DEFB108AA8MXU0 73 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 TFF1P04155 84 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 KITLGP21583 273 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 VDAC2P45880 294 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-204ENST00000447182 SOX8P57073 446 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 LPAL2Q16609 132 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 PRAMEF6Q5VXH4 476 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 DMRTC2Q8IXT2 367 aaPredicted RBP15.85■□□□□ 0.13
SDCBP-204ENST00000447182 ZNF114Q8NC26 417 aa15.85■□□□□ 0.13
SDCBP-204ENST00000447182 RBFOX2O43251 390 aaKnown RBP eCLIP15.84■□□□□ 0.13
SDCBP-204ENST00000447182 ARL14EPLP0DKL9 152 aa15.84■□□□□ 0.13
SDCBP-204ENST00000447182 GPR12P47775 334 aa15.84■□□□□ 0.13
SDCBP-204ENST00000447182 CLCF1Q9UBD9 225 aa15.84■□□□□ 0.13
SDCBP-204ENST00000447182 TRBV20OR9-2A0A075B6H5 130 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 FCGR3BO75015 233 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 CXorf1O96002 111 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 YPEL3P61236 119 aaPredicted RBP15.83■□□□□ 0.13
SDCBP-204ENST00000447182 PRAMEF5Q5TYX0 476 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 OR4A16Q8NH70 328 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 SGMS2Q8NHU3 365 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 MGST2Q99735 147 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 GGTLC1Q9BX51 225 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 PATZ1Q9HBE1 687 aaKnown RBP15.83■□□□□ 0.13
SDCBP-204ENST00000447182 AURKAIP1Q9NWT8 199 aaPredicted RBP15.83■□□□□ 0.13
SDCBP-204ENST00000447182 HCFC1P51610 2035 aa15.83■□□□□ 0.13
SDCBP-204ENST00000447182 FRYQ5TBA9 3013 aa15.83■□□□□ 0.12
SDCBP-204ENST00000447182 MDFIC2A0A1B0GVS7 189 aa15.83■□□□□ 0.12
SDCBP-204ENST00000447182 SNRPCP09234 159 aaKnown RBP15.83■□□□□ 0.12
SDCBP-204ENST00000447182 OR4A8P0C604 315 aa15.83■□□□□ 0.12
SDCBP-204ENST00000447182 RAB4BP61018 213 aa15.83■□□□□ 0.12
SDCBP-204ENST00000447182 FAM214BQ7L5A3 538 aa15.83■□□□□ 0.12
SDCBP-204ENST00000447182 CELSR3Q9NYQ7 3312 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 RRHO14718 337 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 TIMM8AO60220 97 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-204ENST00000447182 BMP5P22003 454 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 GUSBP1Q15486 140 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 FAM90A1Q86YD7 464 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 CD177Q8N6Q3 437 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 Q8TCH9 128 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 MS4A5Q9H3V2 200 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 JPT1Q9UK76 154 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 A0A1B0GWJ7 208 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 PGPEP1LA6NFU8 196 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 GFRA3O60609 400 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 MORN2Q502X0 79 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 TMEM178AQ8NBL3 297 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 HEYLQ9NQ87 328 aaPredicted RBP15.82■□□□□ 0.12
SDCBP-204ENST00000447182 FKBP11Q9NYL4 201 aa15.82■□□□□ 0.12
SDCBP-204ENST00000447182 LSM4Q9Y4Z0 139 aaKnown RBP15.82■□□□□ 0.12
SDCBP-204ENST00000447182 TRAV9-1A0A075B6T8 112 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 TIMP3P35625 211 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 ARG2P78540 354 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 RELBQ01201 579 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 USF2Q15853 346 aaPredicted RBP15.81■□□□□ 0.12
SDCBP-204ENST00000447182 CR1LQ2VPA4 569 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 GCNT2Q8N0V5 402 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 TMEM204Q9BSN7 226 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 DCTN5Q9BTE1 182 aa15.81■□□□□ 0.12
SDCBP-204ENST00000447182 YPEL1O60688 119 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 ZNF718Q3SXZ3 478 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 TEX38Q6PEX7 206 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 TMEM256Q8N2U0 113 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 C1orf162Q8NEQ5 155 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-204ENST00000447182 YPEL2Q96QA6 119 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 TRGV8A0A0C4DH27 118 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 GCH1P30793 250 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 PRDX2P32119 198 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 ERVK-16P61578 105 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 SELENOTP62341 195 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 C1orf194Q5T5A4 169 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 MIC13Q5XKP0 118 aa15.8■□□□□ 0.12
SDCBP-204ENST00000447182 CDX2Q99626 313 aaPredicted RBP15.8■□□□□ 0.12
SDCBP-204ENST00000447182 SCO2A0A1W2PP80 73 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms