RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 CD99P14209 185 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 RPS11P62280 158 aaKnown RBP eCLIP7.29□□□□□ -1.24
PTPN3-204ENST00000446349 DTX1Q86Y01 620 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 GTF3AQ92664 365 aaKnown RBP7.29□□□□□ -1.24
PTPN3-204ENST00000446349 TMEM101Q96IK0 257 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 TMEM218A2RU14 115 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 TIAF1O95411 115 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 CA7P43166 264 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 COL4A1P02462 1669 aa7.29□□□□□ -1.24
PTPN3-204ENST00000446349 CDRT15L2A8MXV6 281 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 PGLYRP1O75594 196 aaPredicted RBP7.28□□□□□ -1.24
PTPN3-204ENST00000446349 TGFBR1P36897 503 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 PSMB2P49721 201 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 FAM3BP58499 235 aaPredicted RBP7.28□□□□□ -1.24
PTPN3-204ENST00000446349 TBR1Q16650 682 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 ABLIM2Q6H8Q1 611 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 TM2D1Q9BX74 207 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 TRBV9A0A0B4J1U6 114 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 GPX1P07203 203 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 THBDP07204 575 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 FCGR2BP31994 310 aaPredicted RBP7.28□□□□□ -1.24
PTPN3-204ENST00000446349 GTSCR1Q86UQ5 136 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 PLSCR2Q9NRY7 297 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 DOCK7Q96N67 2140 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 KBTBD11-OT1A0A1B0GTJ5 212 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 LHX2P50458 406 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 KIR2DL4Q99706 377 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 TICRRQ7Z2Z1 1910 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 ZNF253O75346 499 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 DUSP14O95147 198 aaKnown RBP7.28□□□□□ -1.24
PTPN3-204ENST00000446349 GCGP01275 180 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 OR10J1P30954 320 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 VAMP3Q15836 100 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 SLC25A28Q96A46 364 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 RBKSQ9H477 322 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 MAP1LC3AQ9H492 121 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 PARD6AQ9NPB6 346 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 NIT2Q9NQR4 276 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 FER1L5A0AVI2 2057 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 HIST3H3Q16695 136 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 TMEM91Q6ZNR0 172 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 LDLRAD3Q86YD5 345 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 ARPC1AQ92747 370 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 GUCD1Q96NT3 240 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 ALKBH7Q9BT30 221 aaPredicted RBP7.28□□□□□ -1.24
PTPN3-204ENST00000446349 SDK2Q58EX2 2172 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 SNURFLB1AK76 121 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 NDUFS8O00217 210 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 SMAD7O15105 426 aaKnown RBP7.28□□□□□ -1.24
PTPN3-204ENST00000446349 IL11P20809 199 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 FAM166AQ6J272 317 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 BET1LQ9NYM9 111 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 A6NDN8 102 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 SLC25A16P16260 332 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 NANOS3P60323 173 aaKnown RBP7.28□□□□□ -1.24
PTPN3-204ENST00000446349 CX3CL1P78423 397 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 HIST1H2BAQ96A08 127 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 BOLA1Q9Y3E2 137 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 VWA8A3KMH1 1905 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 DOCK8Q8NF50 2099 aa7.28□□□□□ -1.24
PTPN3-204ENST00000446349 AKAP6Q13023 2319 aa7.27□□□□□ -1.24
PTPN3-204ENST00000446349 M0R3E3 92 aa7.27□□□□□ -1.24
PTPN3-204ENST00000446349 RND3P61587 244 aa7.27□□□□□ -1.24
PTPN3-204ENST00000446349 REPIN1Q9BWE0 567 aaKnown RBP7.27□□□□□ -1.24
PTPN3-204ENST00000446349 FANCMQ8IYD8 2048 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 EP300Q09472 2414 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 SCTP09683 121 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 HINT1P49773 126 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 ZNF137PP52743 207 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 LY6EQ16553 131 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 MINOS1Q5TGZ0 78 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 PPP1R27Q86WC6 154 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 LHFPL5Q8TAF8 219 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 TMEM37Q8WXS4 190 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 KLK13Q9UKR3 277 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 MINOS1-NBL1R4GNA1 71 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 TRAV20A0A0B4J274 112 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 HLA-DQA1P01909 254 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 FGF8P55075 233 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 OR2D3Q8NGH3 330 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 SPSB4Q96A44 273 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 OR51M1Q9H341 326 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 SRD5A3Q9H8P0 318 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 GPR132Q9UNW8 380 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 A0A1B0GW15 77 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 PAGE4O60829 102 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 FUT5Q11128 374 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 BCL2P10415 239 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 INSL4Q14641 139 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 KLHDC2Q9Y2U9 406 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 NLRC5Q86WI3 1866 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 NPIPB9F8W1W9 429 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 BTF3P20290 206 aaKnown RBP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 MVDP53602 400 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 ZXDCQ2QGD7 858 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 Q6AWC8 147 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 ZNF826PQ6ZT77 177 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 TRAF4Q9BUZ4 470 aaPredicted RBP7.27□□□□□ -1.25
PTPN3-204ENST00000446349 TCF19Q9Y242 345 aa7.27□□□□□ -1.25
PTPN3-204ENST00000446349 FAM90A9PA6NNJ1 464 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms